RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 ALDH18A1P54886 795 aaKnown RBP6.56□□□□□ -1.36
YBX3-206ENST00000536823 MTTPP55157 894 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 HSD17B7P56937 341 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 RCN2Q14257 317 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 TERF2Q15554 542 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 MEP1AQ16819 746 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 PFKFB4Q16877 469 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 EIF2S3LQ2VIR3 472 aaKnown RBP6.56□□□□□ -1.36
YBX3-206ENST00000536823 TMEM35AQ53FP2 167 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 ZNF324BQ6AW86 544 aaPredicted RBP6.56□□□□□ -1.36
YBX3-206ENST00000536823 METTL2BQ6P1Q9 378 aaKnown RBP6.56□□□□□ -1.36
YBX3-206ENST00000536823 MED27Q6P2C8 311 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 ZNF793Q6ZN11 406 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 MAMDC2Q7Z304 686 aaPredicted RBP6.56□□□□□ -1.36
YBX3-206ENST00000536823 GOLGA7Q7Z5G4 137 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 ZNF595Q8IYB9 648 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 KIF2BQ8N4N8 673 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 TEX9Q8N6V9 391 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 CEP112Q8N8E3 955 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 MDS2Q8NDY4 140 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 TMEM52Q8NDY8 209 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 SRFBP1Q8NEF9 429 aaKnown RBP6.56□□□□□ -1.36
YBX3-206ENST00000536823 NFAM1Q8NET5 270 aaPredicted RBP6.56□□□□□ -1.36
YBX3-206ENST00000536823 OR7G3Q8NG95 312 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 SUN3Q8TAQ9 357 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 ELP5Q8TE02 316 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 SSC4DQ8WTU2 575 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 DCAKDQ8WVC6 231 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 NR4A3Q92570 626 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 NINJ1Q92982 152 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 F2RL3Q96RI0 385 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 TAAR6Q96RI8 345 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 CSF3RQ99062 836 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 TBCDQ9BTW9 1192 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 ROGDIQ9GZN7 287 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 VPS11Q9H270 941 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 LYRM4Q9HD34 91 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 DMRT3Q9NQL9 472 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 PRTFDC1Q9NRG1 225 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 AP5S1Q9NUS5 200 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 OLAHQ9NV23 265 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 STMN3Q9NZ72 180 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 KLHL14Q9P2G3 628 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 CPSF2Q9P2I0 782 aaKnown RBP6.56□□□□□ -1.36
YBX3-206ENST00000536823 ZNF180Q9UJW8 692 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 PCDHGB6Q9Y5F9 930 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 CLDN16Q9Y5I7 305 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 IKBKGQ9Y6K9 419 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 ADGRG4Q8IZF6 3080 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 ZNF407Q9C0G0 2248 aa6.56□□□□□ -1.36
YBX3-206ENST00000536823 GTF3C1Q12789 2109 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 CREBBPQ92793 2442 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 EXOC1LA0A1B0GW35 172 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 GABRR3A8MPY1 467 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 A8MUA0 341 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 TRIM49D1C9J1S8 452 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 POC1B-GALNT4F8VUJ3 575 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 RTCAO00442 366 aaKnown RBP6.55□□□□□ -1.36
YBX3-206ENST00000536823 CLDN4O14493 209 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 UGDHO60701 494 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 MYO1DO94832 1006 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 DDAH2O95865 285 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 LDLRP01130 860 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 RBP1P09455 135 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 RNF224P0DH78 156 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 COL6A2P12110 1019 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 GP1BBP13224 206 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 HIST1H1TP22492 207 aaPredicted RBP6.55□□□□□ -1.36
YBX3-206ENST00000536823 ATP5A1P25705 553 aaKnown RBP6.55□□□□□ -1.36
YBX3-206ENST00000536823 PPP2R1BP30154 601 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 PIK3CBP42338 1070 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 SSR2P43308 183 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 TDGF1P3P51864 188 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 LIM2P55344 173 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 TUBA3CQ13748 450 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 DDX39BQ13838 428 aaKnown RBP6.55□□□□□ -1.36
YBX3-206ENST00000536823 GTF2H2Q13888 395 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 PCBP2Q15366 365 aaKnown RBP eCLIP6.55□□□□□ -1.36
YBX3-206ENST00000536823 OR1C1Q15619 314 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 PRSS53Q2L4Q9 553 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 ZNF766Q5HY98 468 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 DEPDC1Q5TB30 811 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 KHDRBS2Q5VWX1 349 aaKnown RBP6.55□□□□□ -1.36
YBX3-206ENST00000536823 LIPJQ5W064 366 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 GTF2H2CQ6P1K8 395 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 TUBA3EQ6PEY2 450 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 CYP2R1Q6VVX0 501 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 RPS19BP1Q86WX3 136 aaKnown RBP6.55□□□□□ -1.36
YBX3-206ENST00000536823 MYLK4Q86YV6 388 aaPredicted RBP6.55□□□□□ -1.36
YBX3-206ENST00000536823 IFT20Q8IY31 132 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 PTGR2Q8N8N7 351 aaPredicted RBP6.55□□□□□ -1.36
YBX3-206ENST00000536823 L3MBTL4Q8NA19 623 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 APCDD1LQ8NCL9 501 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 UHMK1Q8TAS1 419 aaKnown RBP6.55□□□□□ -1.36
YBX3-206ENST00000536823 TRIM44Q96DX7 344 aaPredicted RBP6.55□□□□□ -1.36
YBX3-206ENST00000536823 CMTM7Q96FZ5 175 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 MAP6Q96JE9 813 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 SIGLEC12Q96PQ1 595 aa6.55□□□□□ -1.36
YBX3-206ENST00000536823 UTP23Q9BRU9 249 aaKnown RBP6.55□□□□□ -1.36
YBX3-206ENST00000536823 CENPKQ9BS16 269 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms