RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 AIFM1O95831 613 aa18.09■□□□□ 0.49
TNFRSF1B-204ENST00000536782 SLC35E2P0CK97 266 aa18.09■□□□□ 0.49
TNFRSF1B-204ENST00000536782 CD1EP15812 388 aa18.09■□□□□ 0.49
TNFRSF1B-204ENST00000536782 NTRK2Q16620 822 aa18.09■□□□□ 0.49
TNFRSF1B-204ENST00000536782 RIPPLY2Q5TAB7 128 aa18.09■□□□□ 0.49
TNFRSF1B-204ENST00000536782 WDR53Q7Z5U6 358 aaPredicted RBP18.09■□□□□ 0.49
TNFRSF1B-204ENST00000536782 LIX1Q8N485 282 aa18.09■□□□□ 0.49
TNFRSF1B-204ENST00000536782 L3MBTL4Q8NA19 623 aa18.09■□□□□ 0.49
TNFRSF1B-204ENST00000536782 NEIL3Q8TAT5 605 aa18.09■□□□□ 0.49
TNFRSF1B-204ENST00000536782 WDR20Q8TBZ3 569 aa18.09■□□□□ 0.49
TNFRSF1B-204ENST00000536782 SLC6A15Q9H2J7 730 aa18.09■□□□□ 0.49
TNFRSF1B-204ENST00000536782 CNOT11Q9UKZ1 510 aaKnown RBP18.09■□□□□ 0.49
TNFRSF1B-204ENST00000536782 RNF11Q9Y3C5 154 aa18.09■□□□□ 0.49
TNFRSF1B-204ENST00000536782 NIPBLQ6KC79 2804 aaeCLIP18.09■□□□□ 0.49
TNFRSF1B-204ENST00000536782 ANKHD1Q8IWZ3 2542 aaKnown RBP18.08■□□□□ 0.49
TNFRSF1B-204ENST00000536782 A0A096LPK6 155 aa18.08■□□□□ 0.48
TNFRSF1B-204ENST00000536782 C2orf92A0A1B0GVN3 265 aa18.08■□□□□ 0.48
TNFRSF1B-204ENST00000536782 HMX2A2RU54 273 aa18.08■□□□□ 0.48
TNFRSF1B-204ENST00000536782 CAPN14A8MX76 684 aa18.08■□□□□ 0.48
TNFRSF1B-204ENST00000536782 FOXE1O00358 373 aaPredicted RBP18.08■□□□□ 0.48
TNFRSF1B-204ENST00000536782 TP53I11O14683 189 aa18.08■□□□□ 0.48
TNFRSF1B-204ENST00000536782 LRATO95237 230 aa18.08■□□□□ 0.48
TNFRSF1B-204ENST00000536782 CLPSP04118 112 aa18.08■□□□□ 0.48
TNFRSF1B-204ENST00000536782 NEK2P51955 445 aa18.08■□□□□ 0.48
TNFRSF1B-204ENST00000536782 UAP1Q16222 522 aaPredicted RBP18.08■□□□□ 0.48
TNFRSF1B-204ENST00000536782 TBCELQ5QJ74 424 aa18.08■□□□□ 0.48
TNFRSF1B-204ENST00000536782 OR52E8Q6IFG1 317 aa18.08■□□□□ 0.48
TNFRSF1B-204ENST00000536782 METTL2BQ6P1Q9 378 aaKnown RBP18.08■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ULK2Q8IYT8 1036 aa18.08■□□□□ 0.48
TNFRSF1B-204ENST00000536782 DIO2Q92813 273 aa18.08■□□□□ 0.48
TNFRSF1B-204ENST00000536782 CPSF2Q9P2I0 782 aaKnown RBP18.08■□□□□ 0.48
TNFRSF1B-204ENST00000536782 L3MBTL1Q9Y468 752 aa18.08■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ANKRD33BA6NCL7 494 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 SIX3O95343 332 aaPredicted RBP18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 CLDN9O95484 217 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 GBAP04062 536 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 GDF1P27539 372 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 PIK3R1P27986 724 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 TYK2P29597 1187 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 SSTR4P31391 388 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ARL1P40616 181 aaPredicted RBP18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 TRPC1P48995 793 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ART1P52961 327 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 DLX5P56178 289 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 HLA-DQA1Q5Y7H0 255 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 TMEM198Q66K66 360 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ARSKQ6UWY0 536 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 UCN3Q969E3 161 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ATP6V1E2Q96A05 226 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 TP53INP1Q96A56 240 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ZNF597Q96LX8 424 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 GPR78Q96P69 363 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 SERPINI1Q99574 410 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 CXorf21Q9HAI6 301 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ABCA4P78363 2273 aa18.07■□□□□ 0.48
TNFRSF1B-204ENST00000536782 HSPB2A8KAH6 182 aa18.06■□□□□ 0.48
TNFRSF1B-204ENST00000536782 TRIM3O75382 744 aaPredicted RBP18.06■□□□□ 0.48
TNFRSF1B-204ENST00000536782 SEMA3DO95025 777 aa18.06■□□□□ 0.48
TNFRSF1B-204ENST00000536782 SERPINB8P50452 374 aa18.06■□□□□ 0.48
TNFRSF1B-204ENST00000536782 DUSP8Q13202 625 aa18.06■□□□□ 0.48
TNFRSF1B-204ENST00000536782 RPS6KA2Q15349 733 aa18.06■□□□□ 0.48
TNFRSF1B-204ENST00000536782 HSPB2Q16082 182 aa18.06■□□□□ 0.48
TNFRSF1B-204ENST00000536782 TMEM64Q6YI46 380 aa18.06■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ZNF572Q7Z3I7 529 aaPredicted RBP18.06■□□□□ 0.48
TNFRSF1B-204ENST00000536782 GALNT12Q8IXK2 581 aa18.06■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ZNF441Q8N8Z8 693 aa18.06■□□□□ 0.48
TNFRSF1B-204ENST00000536782 NOL11Q9H8H0 719 aaKnown RBP18.06■□□□□ 0.48
TNFRSF1B-204ENST00000536782 NPFFR2Q9Y5X5 522 aa18.06■□□□□ 0.48
TNFRSF1B-204ENST00000536782 MPDZO75970 2070 aa18.06■□□□□ 0.48
TNFRSF1B-204ENST00000536782 C15orf38-AP3S2A0A0A6YYH1 394 aa18.05■□□□□ 0.48
TNFRSF1B-204ENST00000536782 PGRMC2O15173 223 aa18.05■□□□□ 0.48
TNFRSF1B-204ENST00000536782 KRT38O76015 456 aa18.05■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ALDOAP04075 364 aaKnown RBP18.05■□□□□ 0.48
TNFRSF1B-204ENST00000536782 DNAJA1P31689 397 aaKnown RBP18.05■□□□□ 0.48
TNFRSF1B-204ENST00000536782 PHBP35232 272 aa18.05■□□□□ 0.48
TNFRSF1B-204ENST00000536782 PEX19P40855 299 aa18.05■□□□□ 0.48
TNFRSF1B-204ENST00000536782 TMED10P49755 219 aaKnown RBP18.05■□□□□ 0.48
TNFRSF1B-204ENST00000536782 NRG3P56975 720 aa18.05■□□□□ 0.48
TNFRSF1B-204ENST00000536782 FBXW4P57775 412 aa18.05■□□□□ 0.48
TNFRSF1B-204ENST00000536782 NRGNQ92686 78 aa18.05■□□□□ 0.48
TNFRSF1B-204ENST00000536782 CDK15Q96Q40 435 aa18.05■□□□□ 0.48
TNFRSF1B-204ENST00000536782 VPS11Q9H270 941 aa18.05■□□□□ 0.48
TNFRSF1B-204ENST00000536782 TEX10Q9NXF1 929 aaPredicted RBP18.05■□□□□ 0.48
TNFRSF1B-204ENST00000536782 DNAJB12Q9NXW2 375 aaKnown RBP18.05■□□□□ 0.48
TNFRSF1B-204ENST00000536782 A0A1W2PS29 197 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ESYT3A0FGR9 886 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 AHRRA9YTQ3 701 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 OR7A17O14581 309 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 SNX4O95219 450 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 KIR2DL3P43628 341 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 CCNG1P51959 295 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 CKAP4Q07065 602 aaKnown RBP18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 FUT7Q11130 342 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 TECRLQ5HYJ1 363 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 C6orf163Q5TEZ5 329 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 FRG2Q64ET8 278 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 TTC19Q6DKK2 380 aaPredicted RBP18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 SEM1Q6ZVN7 128 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 PACS2Q86VP3 889 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ZZZ3Q8IYH5 903 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms