RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 ABCB7O75027 752 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 MATN4O95460 622 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 ETFAP13804 333 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 ACPPP15309 386 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 ENDOUP21128 410 aaKnown RBP7.81□□□□□ -1.16
ABCA4-207ENST00000536513 RYKP34925 604 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 MAT1AQ00266 395 aaKnown RBP7.81□□□□□ -1.16
ABCA4-207ENST00000536513 SLAMF1Q13291 335 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 C18orf63Q68DL7 685 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 ZNF544Q6NX49 715 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 CARM1Q86X55 608 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 MEX3DQ86XN8 651 aaKnown RBP7.81□□□□□ -1.16
ABCA4-207ENST00000536513 RNF130Q86XS8 419 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 CADM2Q8N3J6 435 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 GALNT6Q8NCL4 622 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 FBXO15Q8NCQ5 510 aaPredicted RBP7.81□□□□□ -1.16
ABCA4-207ENST00000536513 GFM1Q96RP9 751 aaKnown RBP7.81□□□□□ -1.16
ABCA4-207ENST00000536513 KCNS3Q9BQ31 491 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 EFCAB11Q9BUY7 163 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 ZNF700Q9H0M5 742 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 DCSTAMPQ9H295 470 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 UTS2RQ9UKP6 389 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 ATXN7L1Q9ULK2 861 aaPredicted RBP7.81□□□□□ -1.16
ABCA4-207ENST00000536513 GPR34Q9UPC5 381 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 RUVBL1Q9Y265 456 aaKnown RBP7.81□□□□□ -1.16
ABCA4-207ENST00000536513 SNRNP200O75643 2136 aaKnown RBP7.81□□□□□ -1.16
ABCA4-207ENST00000536513 CCDC88CQ9P219 2028 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 LOC105369274A0A096LPK9 316 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 LOC102723532A0A0G2JNH3 316 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 A0A1W2PRB8 838 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 C12orf71A8MTZ7 269 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 PRAMEF26H0Y7S4 382 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 LAMTOR5O43504 91 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 DYRK3O43781 588 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 HLCSP50747 726 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 NCBP2P52298 156 aaKnown RBP eCLIP7.81□□□□□ -1.16
ABCA4-207ENST00000536513 EPS8Q12929 822 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 LASP1Q14847 261 aaKnown RBP7.81□□□□□ -1.16
ABCA4-207ENST00000536513 SPCS2Q15005 226 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 GPAT3Q53EU6 434 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 PRPF38BQ5VTL8 546 aaKnown RBP7.81□□□□□ -1.16
ABCA4-207ENST00000536513 KIAA1614Q5VZ46 1190 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 TMEM184AQ6ZMB5 413 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 KLHDC8AQ8IYD2 350 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 OR4N4Q8N0Y3 316 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 TMEM102Q8N9M5 508 aaPredicted RBP7.81□□□□□ -1.16
ABCA4-207ENST00000536513 MINDY2Q8NBR6 621 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 SETD9Q8NE22 299 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 OR5D16Q8NGK9 328 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 EFHD2Q96C19 240 aaPredicted RBP7.81□□□□□ -1.16
ABCA4-207ENST00000536513 ITCHQ96J02 903 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 APOL4Q9BPW4 351 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 UGT2B28Q9BY64 529 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 ZCCHC3Q9NUD5 404 aaKnown RBP7.81□□□□□ -1.16
ABCA4-207ENST00000536513 ZNF624Q9P2J8 865 aaPredicted RBP7.81□□□□□ -1.16
ABCA4-207ENST00000536513 FZD4Q9ULV1 537 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 PPT2Q9UMR5 302 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 PCDHB11Q9Y5F2 797 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 PIEZO2Q9H5I5 2752 aa7.81□□□□□ -1.16
ABCA4-207ENST00000536513 AGAP14A8MT82 685 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 FAM227AF5H4B4 570 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 I3L521 148 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 GNB5O14775 395 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 WISP3O95389 354 aaPredicted RBP7.8□□□□□ -1.16
ABCA4-207ENST00000536513 SLC35G6P0C7Q6 338 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 F3P13726 295 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 IDUAP35475 653 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 MAP2K4P45985 399 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 TRAP1Q12931 704 aaKnown RBP7.8□□□□□ -1.16
ABCA4-207ENST00000536513 TOP3AQ13472 1001 aaPredicted RBP7.8□□□□□ -1.16
ABCA4-207ENST00000536513 ENPP6Q6UWR7 440 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 ADAMTSL4Q6UY14 1074 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 BTLAQ7Z6A9 289 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 FAM86B1Q8N7N1 296 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 C19orf18Q8NEA5 215 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 GRPEL2Q8TAA5 225 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 THAP3Q8WTV1 239 aaPredicted RBP7.8□□□□□ -1.16
ABCA4-207ENST00000536513 HOPXQ9BPY8 73 aaPredicted RBP7.8□□□□□ -1.16
ABCA4-207ENST00000536513 SLC35A5Q9BS91 424 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 NTMT1Q9BV86 223 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 CNPPD1Q9BV87 410 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 GSDMCQ9BYG8 508 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 TPT1P8Q9HAU6 139 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 TRPS1Q9UHF7 1281 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 FAM86C2PA6NEL3 165 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 JRKO75564 520 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 CSF2P04141 144 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 GPIP06744 558 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 NT5EP21589 574 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 CXCR2P25025 360 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 ABATP80404 500 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 DPTQ07507 201 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 SP140Q13342 867 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 DAG1Q14118 895 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 NPTX1Q15818 432 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 ZNF362Q5T0B9 420 aaPredicted RBP7.8□□□□□ -1.16
ABCA4-207ENST00000536513 KIAA0895LQ68EN5 471 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 POMZP3Q6PJE2 187 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 PRSS41Q7RTY9 318 aa7.8□□□□□ -1.16
ABCA4-207ENST00000536513 TAGAPQ8N103 731 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms