RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 NME6O75414 186 aaPredicted RBP15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 APOA1P02647 267 aa15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 FGBP02675 491 aa15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 CKMT1AP12532 417 aa15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 RPS19P39019 145 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 OPRD1P41143 372 aa15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 CSNK1G2P78368 415 aa15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 PRDX1Q06830 199 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 CCBE1Q6UXH8 406 aaPredicted RBP15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 GDPD3Q7L5L3 318 aa15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 SP7Q8TDD2 431 aaPredicted RBP15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 PAWRQ96IZ0 340 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 ZFYVE19Q96K21 471 aa15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 AMDHD1Q96NU7 426 aa15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 KCNS3Q9BQ31 491 aa15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 FNDC11Q9BVV2 318 aa15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 POLDIP3Q9BY77 421 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 GLIPR2Q9H4G4 154 aa15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 BCL2L10Q9HD36 194 aa15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 DPP7Q9UHL4 492 aa15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 SLC9A8Q9Y2E8 581 aa15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 DENND4AQ7Z401 1863 aa15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 A0A0A6YYD5 115 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 KMOO15229 486 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 TP53P04637 393 aaPredicted RBP15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 SLC35G4P0C7Q5 338 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 TNNI3P19429 210 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 TNFSF8P32971 234 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 CRYBB2P43320 205 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 UBE3AQ05086 875 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 ZNF91Q05481 1191 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 C1DQ13901 141 aaKnown RBP15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 NDUFAF5Q5TEU4 345 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 DESI1Q6ICB0 168 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 PODNL1Q6PEZ8 512 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 AKAP14Q86UN6 197 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 TTLQ8NG68 377 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 SLC35G5Q96KT7 338 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 DPH7Q9BTV6 452 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 TSSK6Q9BXA6 273 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 POLR2J2Q9GZM3 115 aaKnown RBP15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 MVB12BQ9H7P6 319 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 EXOSC4Q9NPD3 245 aaKnown RBP15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 SLC35C2Q9NQQ7 365 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 LRIT2A6NDA9 550 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 GPR89AB7ZAQ6 455 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 EIF2S1P05198 315 aaKnown RBP15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 POU2F2P09086 479 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 GPR89BP0CG08 455 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 GPC1P35052 558 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 SOX3P41225 446 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 GIPRP48546 466 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 RORCP51449 518 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 CLCNKAP51800 687 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 MLLT11Q13015 90 aaPredicted RBP15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 TMEM35AQ53FP2 167 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 ATAD3BQ5T9A4 648 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 KIAA1161Q6NSJ0 714 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 ZER1Q7Z7L7 766 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 LINC01555Q8NAE3 123 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 CREB3L4Q8TEY5 395 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 CHAC2Q8WUX2 184 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 UCN3Q969E3 161 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 SLC6A18Q96N87 628 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 FAIM2Q9BWQ8 316 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 C11orf49Q9H6J7 331 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 NDUFB11Q9NX14 153 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 TVP23BQ9NYZ1 205 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 TRPC4Q9UBN4 977 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 HCN2Q9UL51 889 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 STUB1Q9UNE7 303 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 CAB39Q9Y376 341 aaPredicted RBP15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 TRPM6Q9BX84 2022 aa15.15■□□□□ 0.02
CHMP1A-202ENST00000535997 IGLON5A6NGN9 336 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 TLX2O43763 284 aaPredicted RBP15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 PCCBP05166 539 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 HBQ1P09105 142 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 PCYT1AP49585 367 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 CAMK1Q14012 370 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 GNA13Q14344 377 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 KCNJ8Q15842 424 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 KIAA1211LQ6NV74 962 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 C1orf94Q6P1W5 598 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 BHLHB9Q6PI77 547 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 AMER3Q8N944 861 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 OR5D16Q8NGK9 328 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 OR9Q1Q8NGQ5 310 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 BBS10Q8TAM1 723 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 ERLEC1Q96DZ1 483 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 SDHCQ99643 169 aaPredicted RBP15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 PRSS16Q9NQE7 514 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 ZCCHC3Q9NUD5 404 aaKnown RBP15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 CXXC1Q9P0U4 656 aaPredicted RBP15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 KLHL20Q9Y2M5 609 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 GOLGA4Q13439 2230 aaKnown RBP15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 TBC1D3BA6NDS4 549 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 ZNF670-ZNF695F2Z2N8 137 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 LGI1O95970 557 aa15.14■□□□□ 0.01
CHMP1A-202ENST00000535997 ACADMP11310 421 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms