RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 LGI1O95970 557 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 MT-CYBP00156 380 aaPredicted RBP6.26□□□□□ -1.41
USP28-202ENST00000535607 TIMP1P01033 207 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 IFNA14P01570 189 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 IL1AP01583 271 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 HLA-DQB2P05538 268 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 F7P08709 466 aaPredicted RBP6.26□□□□□ -1.41
USP28-202ENST00000535607 TSPAN19P0C672 248 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 HSMCR30P0CW71 290 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 ACADMP11310 421 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 G6PDP11413 515 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 PIPP12273 146 aaPredicted RBP6.26□□□□□ -1.41
USP28-202ENST00000535607 CYP4B1P13584 511 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 KCNE1P15382 129 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 MYL12AP19105 171 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 MAGP20916 626 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 PRKACGP22612 351 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 CFL1P23528 166 aaKnown RBP6.26□□□□□ -1.41
USP28-202ENST00000535607 HOXC13P31276 330 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 CCR1P32246 355 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 TALDO1P37837 337 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 TUFMP49411 452 aaKnown RBP6.26□□□□□ -1.41
USP28-202ENST00000535607 RGS4P49798 205 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 ETV1P50549 477 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 DAPP51397 102 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 FOXA1P55317 472 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 RAB1AP62820 205 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 PPP3R1P63098 170 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 RHAGQ02094 409 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 VEZF1Q14119 521 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 EFR3AQ14156 821 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 ZBTB6Q15916 424 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 BTBD16Q32M84 506 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 FAM174BQ3ZCQ3 159 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 KHDC1LQ5JSQ8 128 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 FAM182AQ5T1J6 154 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 LRIF1Q5T3J3 769 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 FAM72AQ5TYM5 149 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 OTUD1Q5VV17 481 aaPredicted RBP6.26□□□□□ -1.41
USP28-202ENST00000535607 SYPL2Q5VXT5 272 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 FAM72DQ6L9T8 149 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 KDELC1Q6UW63 502 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 SEM1Q6ZVN7 128 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 RPS27LQ71UM5 84 aaKnown RBP6.26□□□□□ -1.41
USP28-202ENST00000535607 EIF3MQ7L2H7 374 aaKnown RBP6.26□□□□□ -1.41
USP28-202ENST00000535607 KCTD20Q7Z5Y7 419 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 DNAJB7Q7Z6W7 309 aaPredicted RBP6.26□□□□□ -1.41
USP28-202ENST00000535607 MRPL10Q7Z7H8 261 aaKnown RBP6.26□□□□□ -1.41
USP28-202ENST00000535607 CYP4Z1Q86W10 505 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 FAM72BQ86X60 149 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 CALHM3Q86XJ0 350 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 NATD1Q8N6N6 113 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 LRRC17Q8N6Y2 441 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 BRSK1Q8TDC3 778 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 AKAP1Q92667 903 aaKnown RBP eCLIP6.26□□□□□ -1.41
USP28-202ENST00000535607 NELL1Q92832 810 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 ULK4Q96C45 1275 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 SMARCD1Q96GM5 515 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 CELF6Q96J87 481 aaKnown RBP6.26□□□□□ -1.41
USP28-202ENST00000535607 LOXL4Q96JB6 756 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 RADILQ96JH8 1075 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 KCNA7Q96RP8 456 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 MGLLQ99685 303 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 ADAM2Q99965 735 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 GDF15Q99988 308 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 KCNS3Q9BQ31 491 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 TBCDQ9BTW9 1192 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 SARGQ9BW04 601 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 MND1Q9BWT6 205 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 MRPL9Q9BYD2 267 aaKnown RBP6.26□□□□□ -1.41
USP28-202ENST00000535607 SLC29A3Q9BZD2 475 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 ULBP1Q9BZM6 244 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 ROGDIQ9GZN7 287 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 KCNN2Q9H2S1 579 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 PPA2Q9H2U2 334 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 DPEP3Q9H4B8 488 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 CLMPQ9H6B4 373 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 BRD9Q9H8M2 597 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 ANKRA2Q9H9E1 313 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 RANGRFQ9HD47 186 aaPredicted RBP6.26□□□□□ -1.41
USP28-202ENST00000535607 RASSF1Q9NS23 344 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 TMEM161AQ9NX61 479 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 VAPAQ9P0L0 249 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 CFAP97Q9P2B7 532 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 HECAQ9UBI9 543 aaPredicted RBP6.26□□□□□ -1.41
USP28-202ENST00000535607 GIMAP2Q9UG22 337 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 ATP6V1HQ9UI12 483 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 TBC1D24Q9ULP9 559 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 SNX6Q9UNH7 406 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 USP22Q9UPT9 525 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 MAN2B2Q9Y2E5 1009 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 CRYL1Q9Y2S2 319 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 POLR3HQ9Y535 204 aaPredicted RBP6.26□□□□□ -1.41
USP28-202ENST00000535607 SNX8Q9Y5X2 465 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 U3KQV3 271 aa6.26□□□□□ -1.41
USP28-202ENST00000535607 ALPK3Q96L96 1907 aa6.25□□□□□ -1.41
USP28-202ENST00000535607 A0A1B0GVM2 712 aa6.25□□□□□ -1.41
USP28-202ENST00000535607 FAM240BA0A1B0GVZ2 78 aa6.25□□□□□ -1.41
USP28-202ENST00000535607 ABHD14A-ACY1A0A1B0GW23 586 aa6.25□□□□□ -1.41
USP28-202ENST00000535607 A0A1B0GW55 424 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms