RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 SPG21Q9NZD8 308 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 NYAP2Q9P242 653 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 Q9UF83 564 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 CIDEBQ9UHD4 219 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 IKZF3Q9UKT9 509 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 CLEC4EQ9ULY5 219 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 CROCCQ5TZA2 2017 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 FGD5Q6ZNL6 1462 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 FER1L5A0AVI2 2057 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 TRABD2BA6NFA1 517 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 MEI4A8MW99 385 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 K7ERI5 159 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 SAP18O00422 153 aaKnown RBP3.68□□□□□ -1.82
PRKDC-205ENST00000535375 RTN2O75298 545 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 CPNE6O95741 557 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 SNRPCP09234 159 aaKnown RBP3.68□□□□□ -1.82
PRKDC-205ENST00000535375 PGAM2P15259 253 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 ZNF19P17023 458 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 FASP25445 335 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 GDF1P27539 372 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 MAGEA9P43362 315 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 RGRP47804 291 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 ARHGDIAP52565 204 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 SLC25A1P53007 311 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 SNU13P55769 128 aaKnown RBP3.68□□□□□ -1.82
PRKDC-205ENST00000535375 STX1BP61266 288 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 PRKCEQ02156 737 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 HSPA14Q0VDF9 509 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 GIT2Q14161 759 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 LASP1Q14847 261 aaKnown RBP3.68□□□□□ -1.82
PRKDC-205ENST00000535375 KBTBD12Q3ZCT8 623 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 CGB2Q6NT52 195 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 OR4F5Q8NH21 305 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 ZNF671Q8TAW3 534 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 PNPLA2Q96AD5 504 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 CACNG6Q9BXT2 260 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 ACPTQ9BZG2 426 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 DBNDD1Q9H9R9 158 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 PDFQ9HBH1 243 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 PNPLA3Q9NST1 481 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 ZNF446Q9NWS9 450 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 TECRQ9NZ01 308 aaKnown RBP3.68□□□□□ -1.82
PRKDC-205ENST00000535375 KNSTRNQ9Y448 316 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 OBSCNQ5VST9 7968 aa3.68□□□□□ -1.82
PRKDC-205ENST00000535375 KLF18A0A0U1RQI7 1052 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 TMEM129A0AVI4 362 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 EFCAB7A8K855 629 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 E7ENQ6 273 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 TNFSF11O14788 317 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 NUDT14O95848 222 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 GOT2P00505 430 aaKnown RBP3.67□□□□□ -1.82
PRKDC-205ENST00000535375 IGHG3P01860 377 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 GIG44P09565 113 aaPredicted RBP3.67□□□□□ -1.82
PRKDC-205ENST00000535375 TPBGLP0DKB5 382 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 PRG2P13727 222 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 SERPINB6P35237 376 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 MEOX2P50222 304 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 MFAP2P55001 183 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 CDKL1Q00532 357 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 ACTN3Q08043 901 aaPredicted RBP3.67□□□□□ -1.82
PRKDC-205ENST00000535375 C2orf76Q3KRA6 126 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 KRTAP13-3Q3SY46 172 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 SLC39A12Q504Y0 691 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 CD164L2Q6UWJ8 174 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 ITIH5Q86UX2 942 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 SPC24Q8NBT2 197 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 HAS2Q92819 552 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 CXorf58Q96LI9 332 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 ATP6V0BQ99437 205 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 MAPKAP1Q9BPZ7 522 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 TTYH2Q9BSA4 534 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 SLC25A19Q9HC21 320 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 MID1IP1Q9NPA3 183 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 TIGARQ9NQ88 270 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 ANAPC11Q9NYG5 84 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 ADAM22Q9P0K1 906 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 MLXQ9UH92 298 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 PRO0461Q9UI25 63 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 MRTO4Q9UKD2 239 aaKnown RBP3.67□□□□□ -1.82
PRKDC-205ENST00000535375 GON4LQ3T8J9 2241 aa3.67□□□□□ -1.82
PRKDC-205ENST00000535375 IGKV6D-21A0A0A0MT36 114 aa3.66□□□□□ -1.82
PRKDC-205ENST00000535375 H0Y9J4 135 aa3.66□□□□□ -1.82
PRKDC-205ENST00000535375 CHRNGP07510 517 aa3.66□□□□□ -1.82
PRKDC-205ENST00000535375 CT45A8P0DMV1 189 aa3.66□□□□□ -1.82
PRKDC-205ENST00000535375 CT45A9P0DMV2 189 aa3.66□□□□□ -1.82
PRKDC-205ENST00000535375 MDH2P40926 338 aaKnown RBP3.66□□□□□ -1.82
PRKDC-205ENST00000535375 TNFSF10P50591 281 aa3.66□□□□□ -1.82
PRKDC-205ENST00000535375 UBXN1Q04323 297 aa3.66□□□□□ -1.82
PRKDC-205ENST00000535375 MICAQ29983 383 aa3.66□□□□□ -1.82
PRKDC-205ENST00000535375 FUT11Q495W5 492 aa3.66□□□□□ -1.82
PRKDC-205ENST00000535375 CT45A2Q5DJT8 189 aa3.66□□□□□ -1.82
PRKDC-205ENST00000535375 FAM219BQ5XKK7 198 aa3.66□□□□□ -1.82
PRKDC-205ENST00000535375 TATDN1Q6P1N9 297 aa3.66□□□□□ -1.82
PRKDC-205ENST00000535375 APOOLQ6UXV4 268 aa3.66□□□□□ -1.82
PRKDC-205ENST00000535375 RAPH1Q70E73 1250 aa3.66□□□□□ -1.82
PRKDC-205ENST00000535375 UBTD2Q8WUN7 234 aa3.66□□□□□ -1.82
PRKDC-205ENST00000535375 KRT35Q92764 455 aa3.66□□□□□ -1.82
PRKDC-205ENST00000535375 BCL2L2Q92843 193 aaPredicted RBP3.66□□□□□ -1.82
PRKDC-205ENST00000535375 CCDC43Q96MW1 224 aaKnown RBP3.66□□□□□ -1.82
PRKDC-205ENST00000535375 Q9HAA7 133 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms