RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 DCTN4Q9UJW0 460 aa12.22□□□□□ -0.45
TMEM258-202ENST00000535042 ENTPD4Q9Y227 616 aa12.22□□□□□ -0.45
TMEM258-202ENST00000535042 PCDHGA9Q9Y5G4 932 aaKnown RBP12.22□□□□□ -0.45
TMEM258-202ENST00000535042 GPR45Q9Y5Y3 372 aa12.22□□□□□ -0.45
TMEM258-202ENST00000535042 DSPP15924 2871 aaKnown RBP12.21□□□□□ -0.45
TMEM258-202ENST00000535042 KMT2BQ9UMN6 2715 aaPredicted RBP12.21□□□□□ -0.45
TMEM258-202ENST00000535042 TMEM200CA6NKL6 621 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 EFNA1P20827 205 aaPredicted RBP12.21□□□□□ -0.45
TMEM258-202ENST00000535042 PRPS1L1P21108 318 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 SSTR4P31391 388 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 HPCAL1P37235 193 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 ST13P50502 369 aaKnown RBP12.21□□□□□ -0.45
TMEM258-202ENST00000535042 CLCN2P51788 898 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 NME5P56597 212 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 UFM1P61960 85 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 MRPS35P82673 323 aaKnown RBP12.21□□□□□ -0.45
TMEM258-202ENST00000535042 FUT7Q11130 342 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 MAP4K2Q12851 820 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 SF3A3Q12874 501 aaKnown RBP eCLIP12.21□□□□□ -0.45
TMEM258-202ENST00000535042 DUSP8Q13202 625 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 TRMT12Q53H54 448 aaKnown RBP12.21□□□□□ -0.45
TMEM258-202ENST00000535042 ZNF628Q5EBL2 1059 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 C16orf47Q6ZP98 133 aaPredicted RBP12.21□□□□□ -0.45
TMEM258-202ENST00000535042 R3HCC1LQ7Z5L2 792 aaKnown RBP12.21□□□□□ -0.45
TMEM258-202ENST00000535042 GALNT12Q8IXK2 581 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 SAMD14Q8IZD0 417 aaPredicted RBP12.21□□□□□ -0.45
TMEM258-202ENST00000535042 KAT2AQ92830 837 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 CTHRC1Q96CG8 243 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 COQ8BQ96D53 544 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 WBP1Q96G27 269 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 AMDHD1Q96NU7 426 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 BBC3Q96PG8 261 aaPredicted RBP12.21□□□□□ -0.45
TMEM258-202ENST00000535042 BBS4Q96RK4 519 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 CCDC28BQ9BUN5 200 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 BRINP2Q9C0B6 783 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 ADNPQ9H2P0 1102 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 ANKRA2Q9H9E1 313 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 LIN28AQ9H9Z2 209 aaKnown RBP12.21□□□□□ -0.45
TMEM258-202ENST00000535042 TCF7L2Q9NQB0 619 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 ZNF71Q9NQZ8 489 aaPredicted RBP12.21□□□□□ -0.45
TMEM258-202ENST00000535042 GIMAP4Q9NUV9 329 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 ZNF639Q9UID6 485 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 TUBD1Q9UJT1 453 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 TP53TG5Q9Y2B4 290 aa12.21□□□□□ -0.45
TMEM258-202ENST00000535042 CACNA1GO43497 2377 aa12.21□□□□□ -0.46
TMEM258-202ENST00000535042 CFAP47Q6ZTR5 3102 aa12.21□□□□□ -0.46
TMEM258-202ENST00000535042 MGAQ8IWI9 3026 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 C9JVG2 144 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 E9PBE3 544 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 UBDO15205 165 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 POLR3GO15318 223 aaPredicted RBP12.2□□□□□ -0.46
TMEM258-202ENST00000535042 PDPK1O15530 556 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 KLHL41O60662 606 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 CBX7O95931 251 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 PCSK2P16519 638 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 IL12AP29459 219 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 MPIP34949 423 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 FRKP42685 505 aaPredicted RBP12.2□□□□□ -0.46
TMEM258-202ENST00000535042 NCBP2P52298 156 aaKnown RBP eCLIP12.2□□□□□ -0.46
TMEM258-202ENST00000535042 SLC37A1P57057 533 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 PHC1P78364 1004 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 EXOSC7Q15024 291 aaKnown RBP12.2□□□□□ -0.46
TMEM258-202ENST00000535042 CRB2Q5IJ48 1285 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 CPTPQ5TA50 214 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 AGAP7PQ5VUJ5 663 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 IRAK1BP1Q5VVH5 260 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 TCTN3Q6NUS6 607 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 LINC00696Q6ZRV3 163 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 ACAD11Q709F0 780 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 ZNF551Q7Z340 670 aaPredicted RBP12.2□□□□□ -0.46
TMEM258-202ENST00000535042 C9orf40Q8IXQ3 194 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 FAM9CQ8IZT9 166 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 ZNF615Q8N8J6 731 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 C9orf43Q8TAL5 461 aaPredicted RBP12.2□□□□□ -0.46
TMEM258-202ENST00000535042 ZNF675Q8TD23 568 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 THAP3Q8WTV1 239 aaPredicted RBP12.2□□□□□ -0.46
TMEM258-202ENST00000535042 AGAP4Q96P64 663 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 UBL7Q96S82 380 aaPredicted RBP12.2□□□□□ -0.46
TMEM258-202ENST00000535042 DEFB126Q9BYW3 111 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 DPY30Q9C005 99 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 CDCP1Q9H5V8 836 aa12.2□□□□□ -0.46
TMEM258-202ENST00000535042 RALYQ9UKM9 306 aaKnown RBP12.2□□□□□ -0.46
TMEM258-202ENST00000535042 ATXN7O15265 892 aaPredicted RBP12.19□□□□□ -0.46
TMEM258-202ENST00000535042 DYRK3O43781 588 aa12.19□□□□□ -0.46
TMEM258-202ENST00000535042 NME6O75414 186 aaPredicted RBP12.19□□□□□ -0.46
TMEM258-202ENST00000535042 ZFAND5O76080 213 aa12.19□□□□□ -0.46
TMEM258-202ENST00000535042 NTSP30990 170 aa12.19□□□□□ -0.46
TMEM258-202ENST00000535042 RPL3P39023 403 aaKnown RBP12.19□□□□□ -0.46
TMEM258-202ENST00000535042 CD97P48960 835 aa12.19□□□□□ -0.46
TMEM258-202ENST00000535042 CDK9P50750 372 aaKnown RBP12.19□□□□□ -0.46
TMEM258-202ENST00000535042 SEC24CP53992 1094 aa12.19□□□□□ -0.46
TMEM258-202ENST00000535042 WNT3P56703 355 aa12.19□□□□□ -0.46
TMEM258-202ENST00000535042 AP2B1P63010 937 aa12.19□□□□□ -0.46
TMEM258-202ENST00000535042 RNF4P78317 190 aa12.19□□□□□ -0.46
TMEM258-202ENST00000535042 MFAP5Q13361 173 aa12.19□□□□□ -0.46
TMEM258-202ENST00000535042 PDCD4Q53EL6 469 aaKnown RBP12.19□□□□□ -0.46
TMEM258-202ENST00000535042 ACER2Q5QJU3 275 aa12.19□□□□□ -0.46
TMEM258-202ENST00000535042 FHL5Q5TD97 284 aa12.19□□□□□ -0.46
TMEM258-202ENST00000535042 IGFL2Q6UWQ7 119 aa12.19□□□□□ -0.46
TMEM258-202ENST00000535042 ISLR2Q6UXK2 745 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms