RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 RBPMS2Q6ZRY4 209 aaKnown RBP3.07□□□□□ -1.92
USP48-215ENST00000534705 NCCRP1Q6ZVX7 275 aaPredicted RBP3.07□□□□□ -1.92
USP48-215ENST00000534705 APTXQ7Z2E3 356 aaKnown RBP3.07□□□□□ -1.92
USP48-215ENST00000534705 MIER3Q7Z3K6 550 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 PIGWQ7Z7B1 504 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 CTAGE6Q86UF2 777 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 HOOK3Q86VS8 718 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 C4orf19Q8IY42 314 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 ZNF611Q8N823 705 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 RTL3Q8N8U3 475 aaKnown RBP3.07□□□□□ -1.92
USP48-215ENST00000534705 ATAD1Q8NBU5 361 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 ZNF540Q8NDQ6 660 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 STKLD1Q8NE28 680 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 DENND6BQ8NEG7 585 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 TSPAN14Q8NG11 270 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 GRHL3Q8TE85 626 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 RNF128Q8TEB7 428 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 AGAP11Q8TF27 550 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 PTPMT1Q8WUK0 201 aaPredicted RBP3.07□□□□□ -1.92
USP48-215ENST00000534705 ZNF606Q8WXB4 792 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 KIFAP3Q92845 792 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 TOP1MTQ969P6 601 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 DHTKD1Q96HY7 919 aaPredicted RBP3.07□□□□□ -1.92
USP48-215ENST00000534705 C8orf76Q96K31 380 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 NDNQ99608 321 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 OPRPNQ99935 248 aaPredicted RBP3.07□□□□□ -1.92
USP48-215ENST00000534705 EGFL8Q99944 293 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 HSD17B14Q9BPX1 270 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 MGME1Q9BQP7 344 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 LMF2Q9BU23 707 aaKnown RBP3.07□□□□□ -1.92
USP48-215ENST00000534705 NUP85Q9BW27 656 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 YIPF3Q9GZM5 350 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 SLC5A7Q9GZV3 580 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 NT5C3AQ9H0P0 336 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 FAM49AQ9H0Q0 323 aaPredicted RBP3.07□□□□□ -1.92
USP48-215ENST00000534705 DHX33Q9H6R0 707 aaKnown RBP3.07□□□□□ -1.92
USP48-215ENST00000534705 AZI2Q9H6S1 392 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 PELI2Q9HAT8 420 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 TMEM165Q9HC07 324 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 FGF22Q9HCT0 170 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 XPNPEP1Q9NQW7 623 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 ZNF701Q9NV72 531 aaPredicted RBP3.07□□□□□ -1.92
USP48-215ENST00000534705 PTTG2Q9NZH5 202 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 IFNKQ9P0W0 207 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 ZDHHC2Q9UIJ5 367 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 CDH7Q9ULB5 785 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 CHKBQ9Y259 395 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 RALGAPA1Q6GYQ0 2036 aa3.07□□□□□ -1.92
USP48-215ENST00000534705 MYO18AQ92614 2054 aaKnown RBP3.07□□□□□ -1.92
USP48-215ENST00000534705 A0A087WWV3 80 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 A0A087X002 238 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 LOC102723996A0A087X1L8 192 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 IGLV9-49A0A0B4J1Y8 123 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 LOC101059948A0A1B0GTJ6 334 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 MEIOCA2RUB1 952 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 HTR3EA5X5Y0 456 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 CCT8L1PA6NM43 557 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 TMEM110-MUSTN1A8MSY1 372 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 HEPACAM2A8MVW5 462 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 SLC33A1O00400 549 aaPredicted RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 GAPDHSO14556 408 aaPredicted RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 MAGEB2O15479 319 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 TTI1O43156 1089 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 CHMP2AO43633 222 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 OR10H2O60403 315 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 TSPAN1O60635 241 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 PRKRAO75569 313 aaKnown RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 AP2A2O94973 939 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 ARF4P18085 180 aaPredicted RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 CA6P23280 308 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 CEACAM8P31997 349 aaPredicted RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 QARSP47897 775 aaKnown RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 SERPINB8P50452 374 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 CCR3P51677 355 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 LUMP51884 338 aaPredicted RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 CRYBB1P53674 252 aaPredicted RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 SH3BGRP55822 239 aaPredicted RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 NLRP11P59045 1033 aaKnown RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 GMFBP60983 142 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 PSMC5P62195 406 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 MRPS25P82663 173 aaKnown RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 NOTCH2Q04721 2471 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 TP53BP1Q12888 1972 aaPredicted RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 NPRL3Q12980 569 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 ORC2Q13416 577 aaPredicted RBP3.06□□□□□ -1.92
USP48-215ENST00000534705 ITIH4Q14624 930 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 IL11RAQ14626 422 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 TEAD2Q15562 447 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 INAQ16352 499 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 WSCD2Q2TBF2 565 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 ZFP69Q49AA0 526 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 XKR3Q5GH77 459 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 IRGCQ6NXR0 463 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 FAAP20Q6NZ36 180 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 CORO6Q6QEF8 472 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 SUSD1Q6UWL2 747 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 CCDC121Q6ZUS5 278 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 ASRGL1Q7L266 308 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 RABEPKQ7Z6M1 372 aa3.06□□□□□ -1.92
USP48-215ENST00000534705 TMEM110Q86TL2 294 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms