RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 WDR45BQ5MNZ6 344 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 ATAD3BQ5T9A4 648 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 ZNF605Q86T29 641 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 TSPYL5Q86VY4 417 aaPredicted RBP12.62□□□□□ -0.39
BEST1-208ENST00000534553 ALDH16A1Q8IZ83 802 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 CARFQ8N187 725 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 ARL14Q8N4G2 192 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 NUP43Q8NFH3 380 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 LMX1AQ8TE12 382 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 ADAMTS18Q8TE60 1221 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 XAGE5Q8WWM1 108 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 DNASE2BQ8WZ79 361 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 NR4A3Q92570 626 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 TANKQ92844 425 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 UCN3Q969E3 161 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 TCTN2Q96GX1 697 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 HSPA12BQ96MM6 686 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 MS4A4EQ96PG1 132 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 GABARAPL3Q9BY60 117 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 RAB33BQ9H082 229 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 KCND3Q9UK17 655 aa12.62□□□□□ -0.39
BEST1-208ENST00000534553 MDC1Q14676 2089 aaKnown RBP12.61□□□□□ -0.39
BEST1-208ENST00000534553 LOC105369274A0A096LPK9 316 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 LOC102723532A0A0G2JNH3 316 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 GALR3O60755 368 aaPredicted RBP12.61□□□□□ -0.39
BEST1-208ENST00000534553 PRKRAO75569 313 aaKnown RBP12.61□□□□□ -0.39
BEST1-208ENST00000534553 SOX30O94993 753 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 CCDC159P0C7I6 412 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 NELFEP18615 380 aaKnown RBP12.61□□□□□ -0.39
BEST1-208ENST00000534553 CD247P20963 164 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 PIGAP37287 484 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 LSSP48449 732 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 PXNP49023 591 aaPredicted RBP12.61□□□□□ -0.39
BEST1-208ENST00000534553 XKP51811 444 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 CXCR4P61073 352 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 LASP1Q14847 261 aaKnown RBP12.61□□□□□ -0.39
BEST1-208ENST00000534553 NDUFA9Q16795 377 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 MICAQ29983 383 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 PRPF38BQ5VTL8 546 aaKnown RBP12.61□□□□□ -0.39
BEST1-208ENST00000534553 TMEM107Q6UX40 140 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 MAMSTRQ6ZN01 415 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 OR4N4Q8N0Y3 316 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 TTC29Q8NA56 475 aaPredicted RBP12.61□□□□□ -0.39
BEST1-208ENST00000534553 SMYD1Q8NB12 490 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 OR4C15Q8NGM1 316 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 PHF10Q8WUB8 498 aaKnown RBP12.61□□□□□ -0.39
BEST1-208ENST00000534553 FBLIM1Q8WUP2 373 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 RAB8BQ92930 207 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 ZNF566Q969W8 418 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 FKBP10Q96AY3 582 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 CD180Q99467 661 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 SLC38A3Q99624 504 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 ACTRT3Q9BYD9 372 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 SERHL2Q9H4I8 314 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 SOX17Q9H6I2 414 aaPredicted RBP12.61□□□□□ -0.39
BEST1-208ENST00000534553 ZNF556Q9HAH1 456 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 EPHA6Q9UF33 1036 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 SLC9A8Q9Y2E8 581 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 POFUT2Q9Y2G5 429 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 PCDHGA8Q9Y5G5 932 aa12.61□□□□□ -0.39
BEST1-208ENST00000534553 SNRNP200O75643 2136 aaKnown RBP12.61□□□□□ -0.39
BEST1-208ENST00000534553 ARHGEF17Q96PE2 2063 aaPredicted RBP12.6□□□□□ -0.39
BEST1-208ENST00000534553 PRAMEF10O60809 474 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 GADD45GO95257 159 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 EIF2S1P05198 315 aaKnown RBP12.6□□□□□ -0.39
BEST1-208ENST00000534553 PROS1P07225 676 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 PVRP15151 417 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 PORP16435 677 aaPredicted RBP12.6□□□□□ -0.39
BEST1-208ENST00000534553 MC3RP41968 323 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 PRKAG1P54619 331 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 NUP107P57740 925 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 ISL1P61371 349 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 RUNX2Q13950 521 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 GPR19Q15760 415 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 DUSP7Q16829 419 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 COLEC12Q5KU26 742 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 OGFOD3Q6PK18 319 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 TSEN54Q7Z6J9 526 aaKnown RBP12.6□□□□□ -0.39
BEST1-208ENST00000534553 SLC44A2Q8IWA5 706 aaPredicted RBP12.6□□□□□ -0.39
BEST1-208ENST00000534553 OR10G2Q8NGC3 310 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 OR9A2Q8NGT5 310 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 C1orf216Q8TAB5 229 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 APOBEC4Q8WW27 367 aaKnown RBP12.6□□□□□ -0.39
BEST1-208ENST00000534553 COL21A1Q96P44 957 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 TRNT1Q96Q11 434 aaKnown RBP12.6□□□□□ -0.39
BEST1-208ENST00000534553 TSC22D3Q99576 134 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 MIR1-1HGQ9H1L0 117 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 DUSP15Q9H1R2 295 aaPredicted RBP12.6□□□□□ -0.39
BEST1-208ENST00000534553 ANKHQ9HCJ1 492 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 NDRG4Q9ULP0 352 aaKnown RBP12.6□□□□□ -0.39
BEST1-208ENST00000534553 TESMINQ9Y4I5 508 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 GMPPBQ9Y5P6 360 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 SLCO1B1Q9Y6L6 691 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 COMMD3-BMI1R4GMX3 469 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 A0A087WV62 115 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 CCDC163A0A0D9SF12 145 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 MYOCOSA0A1B0GUC4 107 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 VGLL3A8MV65 326 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 STK25O00506 426 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 OXSR1O95747 527 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms