RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	ATG4B	Q9Y4P1	393 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	KNDC1	Q76NI1	1749 aa		4.2	□□□□□ -1.74
ATM-223	ENST00000533979	PDS5A	Q29RF7	1337 aa	Known RBP	4.2	□□□□□ -1.74
ATM-223	ENST00000533979	ADGRB1	O14514	1584 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	NALCN	Q8IZF0	1738 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979		A0A0U1RQS6	177 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	GOLGA8O	A6NCC3	632 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	ANTXRL	A6NF34	631 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979		A8MUI8	341 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	ANKRD66	B4E2M5	251 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	GOLGA8N	F8WBI6	632 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	ARPC2	O15144	300 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	OGT	O15294	1046 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	SNN	O75324	88 aa	Predicted RBP	4.19	□□□□□ -1.74
ATM-223	ENST00000533979	E2F6	O75461	281 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	SERPINA3	P01011	423 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	CRYAA	P02489	173 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	FGF4	P08620	206 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	DPP4	P27487	766 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	PPP2R1A	P30153	589 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	SLC6A8	P48029	635 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	KCNK10	P57789	538 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	NLRP11	P59045	1033 aa	Known RBP	4.19	□□□□□ -1.74
ATM-223	ENST00000533979	KLC1	Q07866	573 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	CDH18	Q13634	790 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	RBBP5	Q15291	538 aa	Known RBP	4.19	□□□□□ -1.74
ATM-223	ENST00000533979	PHKG1	Q16816	387 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	PHLDA2	Q53GA4	152 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	STPG1	Q5TH74	334 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	OR4A47	Q6IF82	309 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	TRNP1	Q6NT89	227 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	CCNI2	Q6ZMN8	369 aa	Predicted RBP	4.19	□□□□□ -1.74
ATM-223	ENST00000533979	MTERF4	Q7Z6M4	381 aa	Known RBP	4.19	□□□□□ -1.74
ATM-223	ENST00000533979	YRDC	Q86U90	279 aa	Known RBP	4.19	□□□□□ -1.74
ATM-223	ENST00000533979	ZNF34	Q8IZ26	560 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	LGI2	Q8N0V4	545 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	TTC5	Q8N0Z6	440 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	BHLHE23	Q8NDY6	225 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	TRPV3	Q8NET8	790 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	OR11H4	Q8NGC9	324 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	OR52K1	Q8NGK4	314 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	ATP8B4	Q8TF62	1192 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	SECTM1	Q8WVN6	248 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	OSTF1	Q92882	214 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	TSACC	Q96A04	125 aa	Predicted RBP	4.19	□□□□□ -1.74
ATM-223	ENST00000533979	RAB39B	Q96DA2	213 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	SENP8	Q96LD8	212 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	UHRF2	Q96PU4	802 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	USP28	Q96RU2	1077 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	MAP3K3	Q99759	626 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.19	□□□□□ -1.74
ATM-223	ENST00000533979	SDCBP2	Q9H190	292 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	LRMDA	Q9H2I8	198 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	C5orf66	Q9H5L9	145 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	METTL7A	Q9H8H3	244 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	FAM114A2	Q9NRY5	505 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	GDAP2	Q9NXN4	497 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	PTTG2	Q9NZH5	202 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	DAPK2	Q9UIK4	370 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	CFAP45	Q9UL16	551 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	PSME2	Q9UL46	239 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	ERVK-19	Q9WJR5	959 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	MRPS33	Q9Y291	106 aa	Known RBP	4.19	□□□□□ -1.74
ATM-223	ENST00000533979	USP32	Q8NFA0	1604 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	KCP	Q6ZWJ8	1503 aa		4.19	□□□□□ -1.74
ATM-223	ENST00000533979	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	4.18	□□□□□ -1.74
ATM-223	ENST00000533979	MBLAC1	A4D2B0	266 aa	Predicted RBP	4.18	□□□□□ -1.74
ATM-223	ENST00000533979	FAM172BP	A6NC97	362 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	ASPDH	A6ND91	283 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	NCF1B	A6NI72	391 aa	Predicted RBP	4.18	□□□□□ -1.74
ATM-223	ENST00000533979	NCF1C	A8MVU1	366 aa	Predicted RBP	4.18	□□□□□ -1.74
ATM-223	ENST00000533979		E5RGE8	158 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	CCL24	O00175	119 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	ZNF197	O14709	1029 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	BUB1	O43683	1085 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	XPNPEP2	O43895	674 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	GRAP2	O75791	330 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	PDE9A	O76083	593 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	UQCRFS1P1	P0C7P4	283 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	CD59	P13987	128 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	CSF2RA	P15509	400 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	CEBPB	P17676	345 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	DUT	P33316	252 aa	Known RBP	4.18	□□□□□ -1.74
ATM-223	ENST00000533979	DLST	P36957	453 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	CETN2	P41208	172 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	PTGFR	P43088	359 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	MAGEA8	P43361	318 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	ACADVL	P49748	655 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	RGS4	P49798	205 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	CLCN4	P51793	760 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	FUT6	P51993	359 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	PDX1	P52945	283 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	ATP5I	P56385	69 aa	Predicted RBP	4.18	□□□□□ -1.74
ATM-223	ENST00000533979	CBX1	P83916	185 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	PDE1B	Q01064	536 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	CNTN2	Q02246	1040 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	DMPK	Q09013	629 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	RBM39	Q14498	530 aa	Known RBP	4.18	□□□□□ -1.74
ATM-223	ENST00000533979	EFTUD2	Q15029	972 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
ATM-223	ENST00000533979	CCDC57	Q2TAC2	916 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms