RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	ACP1	P24666	158 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	SPR	P35270	261 aa	Predicted RBP	2.58	□□□□□ -2
RDX-215	ENST00000533961	GABPA	Q06546	454 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	AP1B1	Q10567	949 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	NPRL3	Q12980	569 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	RPA4	Q13156	261 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	KLF5	Q13887	457 aa	Predicted RBP	2.58	□□□□□ -2
RDX-215	ENST00000533961	FASTK	Q14296	549 aa	Known RBP	2.58	□□□□□ -2
RDX-215	ENST00000533961	MEF2D	Q14814	521 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	EMC2	Q15006	297 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	LTB4R	Q15722	352 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	STXBP2	Q15833	593 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	ZNF789	Q5FWF6	425 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	RTL6	Q6ICC9	239 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	ARMCX5	Q6P1M9	558 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	ZNF584	Q8IVC4	421 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	C11orf53	Q8IXP5	236 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	FGFRL1	Q8N441	504 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	CSNK1G2-AS1	Q8NCQ2	148 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	OR4F17	Q8NGA8	305 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	FLVCR1-AS1	Q8TAF5	88 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	DEFB118	Q96PH6	123 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	OR4F4	Q96R69	305 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	CCT8L2	Q96SF2	557 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	ACAT2	Q9BWD1	397 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	RBM24	Q9BX46	236 aa	Known RBP	2.58	□□□□□ -2
RDX-215	ENST00000533961	KCNMB3	Q9NPA1	279 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	ZNF107	Q9UII5	783 aa	Predicted RBP	2.58	□□□□□ -2
RDX-215	ENST00000533961	FOXA2	Q9Y261	457 aa	Predicted RBP	2.58	□□□□□ -2
RDX-215	ENST00000533961	SLC6A5	Q9Y345	797 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	ATG4B	Q9Y4P1	393 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	CROCC	Q5TZA2	2017 aa		2.58	□□□□□ -2
RDX-215	ENST00000533961	ZNF646	O15015	1829 aa	Predicted RBP	2.57	□□□□□ -2
RDX-215	ENST00000533961		A0A0U1RQG5	324 aa	Predicted RBP	2.57	□□□□□ -2
RDX-215	ENST00000533961		A0A0U1RRA0	63 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	MACROD2	A1Z1Q3	448 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	TMEM89	A2RUT3	159 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	MEI4	A8MW99	385 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	ADAM12	O43184	909 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	KERA	O60938	352 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	SH3BGRL	O75368	114 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	KLK2	P20151	261 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	UCP1	P25874	307 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	RPL34	P49207	117 aa	Known RBP	2.57	□□□□□ -2
RDX-215	ENST00000533961	HMGCS2	P54868	508 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	SRP54	P61011	504 aa	Known RBP	2.57	□□□□□ -2
RDX-215	ENST00000533961	RUNX3	Q13761	415 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	ACER2	Q5QJU3	275 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	LIPK	Q5VXJ0	399 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	CDC42EP5	Q6NZY7	148 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	C11orf88	Q6PI97	169 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	ADGRD2	Q7Z7M1	963 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	ZNF410	Q86VK4	478 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	LINC00518	Q8N0U6	118 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	SLC22A18AS	Q8N1D0	253 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	SPC24	Q8NBT2	197 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	ICA1L	Q8NDH6	482 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	OR52E1	Q8NGJ3	308 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	OR6M1	Q8NGM8	313 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	NTNG2	Q96CW9	530 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	ST6GALNAC5	Q9BVH7	336 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	NLN	Q9BYT8	704 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	CARD9	Q9H257	536 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	SP140L	Q9H930	580 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	NRN1	Q9NPD7	142 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	PIGV	Q9NUD9	493 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	ABCD2	Q9UBJ2	740 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	PRODH2	Q9UF12	536 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	NARF	Q9UHQ1	456 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	LEF1	Q9UJU2	399 aa	Predicted RBP	2.57	□□□□□ -2
RDX-215	ENST00000533961	NPC1L1	Q9UHC9	1359 aa		2.57	□□□□□ -2
RDX-215	ENST00000533961	PRRC2A	P48634	2157 aa	Known RBP	2.57	□□□□□ -2
RDX-215	ENST00000533961	FAM149A	A5PLN7	773 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	ZNF487	B1APH4	448 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961		H3BMH7	237 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	RANBP6	O60518	1105 aa	Known RBP	2.56	□□□□□ -2
RDX-215	ENST00000533961	SRPX2	O60687	465 aa	Predicted RBP	2.56	□□□□□ -2
RDX-215	ENST00000533961	RTN2	O75298	545 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	THY1	P04216	161 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	CT45A8	P0DMV1	189 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	CT45A9	P0DMV2	189 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	MBL2	P11226	248 aa	Predicted RBP	2.56	□□□□□ -2
RDX-215	ENST00000533961	PPP2R1A	P30153	589 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	STIP1	P31948	543 aa	Known RBP	2.56	□□□□□ -2
RDX-215	ENST00000533961	POU3F4	P49335	361 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	CNN1	P51911	297 aa	Known RBP	2.56	□□□□□ -2
RDX-215	ENST00000533961	HAND2	P61296	217 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	SLC10A1	Q14973	349 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	CLPP	Q16740	277 aa	Predicted RBP	2.56	□□□□□ -2
RDX-215	ENST00000533961	C17orf58	Q2M2W7	97 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	C14orf28	Q4W4Y0	310 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	CT45A2	Q5DJT8	189 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	VIT	Q6UXI7	678 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	C1orf186	Q6ZWK4	172 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	RAPH1	Q70E73	1250 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	SIDT2	Q8NBJ9	832 aa	Known RBP	2.56	□□□□□ -2
RDX-215	ENST00000533961	GTSF1	Q8WW33	167 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	RAB39B	Q96DA2	213 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	RPGRIP1	Q96KN7	1286 aa		2.56	□□□□□ -2
RDX-215	ENST00000533961	MID1IP1	Q9NPA3	183 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms