RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	GTPBP3	Q969Y2	492 aa	Known RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	UPRT	Q96BW1	309 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	DPEP2	Q9H4A9	486 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	DDX31	Q9H8H2	851 aa	Known RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	RHCG	Q9UBD6	479 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	KLF15	Q9UIH9	416 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	KLHL21	Q9UJP4	597 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	YARS2	Q9Y2Z4	477 aa	Known RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	PNMA8C	A0A1B0GUJ8	204 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	RFXAP	O00287	272 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	GRM6	O15303	877 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	TGM5	O43548	720 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	TMPRSS11D	O60235	418 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	TRIM3	O75382	744 aa	Predicted RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	LEFTY1	O75610	366 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	MED26	O95402	600 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	GBA	P04062	536 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	ACP2	P11117	423 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	CKMT1A	P12532	417 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	HIST1H2AD	P20671	130 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	CRAT	P43155	626 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	RORC	P51449	518 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	COPZ1	P61923	177 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	RPS25	P62851	125 aa	Known RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	MESP2	Q0VG99	397 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	SREBF2	Q12772	1141 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	TMEM115	Q12893	351 aa	Predicted RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	SLBP	Q14493	270 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	TIMM50	Q3ZCQ8	353 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	THOC7	Q6I9Y2	204 aa	Known RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	SDE2	Q6IQ49	451 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	PODNL1	Q6PEZ8	512 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	P3H2	Q8IVL5	708 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	REM2	Q8IYK8	340 aa	Predicted RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	OR5AK3P	Q8NH89	298 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	RPS4Y2	Q8TD47	263 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	SLC5A11	Q8WWX8	675 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	OR5P2	Q8WZ92	322 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	DIO2	Q92813	273 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	RNF166	Q96A37	237 aa	Predicted RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	MARVELD3	Q96A59	401 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	TMEM19	Q96HH6	336 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	HIST1H2AH	Q96KK5	128 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	LRRC3B	Q96PB8	259 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	HIST1H2AJ	Q99878	128 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	H2AFJ	Q9BTM1	129 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	NUAK2	Q9H093	628 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	ABCB9	Q9NP78	766 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	CRNN	Q9UBG3	495 aa	Predicted RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	ENOPH1	Q9UHY7	261 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	ADAM29	Q9UKF5	820 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	TP53BP1	Q12888	1972 aa	Predicted RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	LOC100506127	A0A0U1RQW1	187 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	TRDV1	A0A1B0GX56	115 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	OR2AG2	A6NM03	316 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	TNFRSF10A	O00220	468 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	DVL2	O14641	736 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	CHRM4	P08173	479 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	POU2F1	P14859	743 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	GABRA5	P31644	462 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	GPC1	P35052	558 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	RPL3	P39023	403 aa	Known RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	SLC6A11	P48066	632 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	IDH2	P48735	452 aa	Known RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	PCYT1A	P49585	367 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	EVX1	P49640	407 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	CDC42	P60953	191 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	ABAT	P80404	500 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	PLA1A	Q53H76	456 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	PRAMEF8	Q5VWM4	474 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	PRAMEF7	Q5VXH5	474 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	HEPHL1	Q6MZM0	1159 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	TRIM40	Q6P9F5	258 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	METAP1D	Q6UB28	335 aa	Predicted RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	LYPD8	Q6UX82	237 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	PARS2	Q7L3T8	475 aa	Known RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	SYTL1	Q8IYJ3	562 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	VWA5B2	Q8N398	1253 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	STX19	Q8N4C7	294 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	OR9A1P	Q8NGU1	263 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	OR2L2	Q8NH16	312 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	WDR36	Q8NI36	951 aa	Known RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	ANGPTL6	Q8NI99	470 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	DNAJA4	Q8WW22	397 aa	Predicted RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	FAM131C	Q96AQ9	280 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	CHFR	Q96EP1	664 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	DEPDC7	Q96QD5	511 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	FYTTD1	Q96QD9	318 aa	Known RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	TREX2	Q9BQ50	279 aa	Predicted RBP	4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	OR51B5	Q9H339	312 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	ERVMER34-1	Q9H9K5	563 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	PELI2	Q9HAT8	420 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	ZNF221	Q9UK13	617 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	HCFC2	Q9Y5Z7	792 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	CDH10	Q9Y6N8	788 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897		A0A1W2PRB8	838 aa		4.17	□□□□□ -1.74
CTSC-208	ENST00000533897	C10orf142	B7Z368	130 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms