RNA–Protein interactions for RNA: ENST00000533666.5

CMTM1-217, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-217ENST00000533666 CXorf21Q9HAI6 301 aa13.15□□□□□ -0.3
CMTM1-217ENST00000533666 PPIEQ9UNP9 301 aaKnown RBP13.15□□□□□ -0.3
CMTM1-217ENST00000533666 EXO1Q9UQ84 846 aaKnown RBP13.15□□□□□ -0.3
CMTM1-217ENST00000533666 KCNMB2Q9Y691 235 aa13.15□□□□□ -0.3
CMTM1-217ENST00000533666 ZZEF1O43149 2961 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 CACNA1GO43497 2377 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 CFAP47Q6ZTR5 3102 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 MYOCOSA0A1B0GUC4 107 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 A0A1W2PRB8 838 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 DYTNA2CJ06 578 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 FAM234BA2RU67 622 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 OR6C76A6NM76 312 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 ANKRD28O15084 1053 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 CCDC22O60826 627 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 ALPPP05187 535 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 IFI6P09912 130 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 LAMP1P11279 417 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 SOX8P57073 446 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 KCNK10P57789 538 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 RHDQ02161 417 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 MAP4K2Q12851 820 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 MLC1Q15049 377 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 FAM174BQ3ZCQ3 159 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 HSDL2Q6YN16 418 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 RNF111Q6ZNA4 994 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 GALNT16Q8N428 558 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 SLC5A8Q8N695 610 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 OR5L2Q8NGL0 311 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 OR1N1Q8NGS0 311 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 SLC2A12Q8TD20 617 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 OR5P2Q8WZ92 322 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 ARHGAP9Q9BRR9 750 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 DEFB126Q9BYW3 111 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 RMND5AQ9H871 391 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 NEUROD4Q9HD90 331 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 RYDENQ9NUL5 291 aaKnown RBP13.14□□□□□ -0.31
CMTM1-217ENST00000533666 FAM120CQ9NX05 1096 aaKnown RBP13.14□□□□□ -0.31
CMTM1-217ENST00000533666 COPG1Q9Y678 874 aaKnown RBP13.14□□□□□ -0.31
CMTM1-217ENST00000533666 MED13Q9UHV7 2174 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 ZFHX4Q86UP3 3567 aa13.14□□□□□ -0.31
CMTM1-217ENST00000533666 PRSS51A0A1B0GVH4 220 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 MKRN2OSH3BPM6 223 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 RNASET2O00584 256 aaKnown RBP13.13□□□□□ -0.31
CMTM1-217ENST00000533666 CFLARO15519 480 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 SNX3O60493 162 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 PRAMEF2O60811 474 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 SHOX2O60902 331 aaPredicted RBP13.13□□□□□ -0.31
CMTM1-217ENST00000533666 COQ9O75208 318 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 ZFAND5O76080 213 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 PGRP06401 933 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 ADSLP30566 484 aaPredicted RBP13.13□□□□□ -0.31
CMTM1-217ENST00000533666 FRKP42685 505 aaPredicted RBP13.13□□□□□ -0.31
CMTM1-217ENST00000533666 CCL11P51671 97 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 POLR2JP52435 117 aaKnown RBP13.13□□□□□ -0.31
CMTM1-217ENST00000533666 PRR5P85299 388 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 SF3A3Q12874 501 aaKnown RBP eCLIP13.13□□□□□ -0.31
CMTM1-217ENST00000533666 PRICKLE4Q2TBC4 344 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 ZNF750Q32MQ0 723 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 GKAP1Q5VSY0 366 aaPredicted RBP13.13□□□□□ -0.31
CMTM1-217ENST00000533666 AGAP7PQ5VUJ5 663 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 BHLHB9Q6PI77 547 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 MSANTD1Q6ZTZ1 278 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 SLC29A4Q7RTT9 530 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 NFAM1Q8NET5 270 aaPredicted RBP13.13□□□□□ -0.31
CMTM1-217ENST00000533666 OR9A2Q8NGT5 310 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 OR8K3Q8NH51 312 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 C10orf82Q8WW14 230 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 NCLNQ969V3 563 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 CIDECQ96AQ7 238 aaPredicted RBP13.13□□□□□ -0.31
CMTM1-217ENST00000533666 THOC3Q96J01 351 aaKnown RBP13.13□□□□□ -0.31
CMTM1-217ENST00000533666 AGAP4Q96P64 663 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 OR52E6Q96RD3 313 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 GLIPR2Q9H4G4 154 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 PRORYQ9H606 182 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 C3orf14Q9HBI5 128 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 ABI3Q9P2A4 366 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 PTGFRNQ9P2B2 879 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 PRODH2Q9UF12 536 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 ERVK-19Q9WJR5 959 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 CACNA1BQ00975 2339 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 LAMA5O15230 3695 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 DOCK10Q96BY6 2186 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 MGAQ8IWI9 3026 aa13.13□□□□□ -0.31
CMTM1-217ENST00000533666 NUP214P35658 2090 aaPredicted RBP13.12□□□□□ -0.31
CMTM1-217ENST00000533666 A0A087WV62 115 aa13.12□□□□□ -0.31
CMTM1-217ENST00000533666 TRBV11-1A0A0K0K1C0 115 aa13.12□□□□□ -0.31
CMTM1-217ENST00000533666 PLOD2O00469 737 aa13.12□□□□□ -0.31
CMTM1-217ENST00000533666 SLC22A2O15244 555 aa13.12□□□□□ -0.31
CMTM1-217ENST00000533666 PLOD3O60568 738 aa13.12□□□□□ -0.31
CMTM1-217ENST00000533666 DDAH2O95865 285 aa13.12□□□□□ -0.31
CMTM1-217ENST00000533666 FAM107AO95990 144 aa13.12□□□□□ -0.31
CMTM1-217ENST00000533666 GPX3P22352 226 aa13.12□□□□□ -0.31
CMTM1-217ENST00000533666 FUT7Q11130 342 aa13.12□□□□□ -0.31
CMTM1-217ENST00000533666 HSPB3Q12988 150 aa13.12□□□□□ -0.31
CMTM1-217ENST00000533666 MYBPC3Q14896 1274 aa13.12□□□□□ -0.31
CMTM1-217ENST00000533666 MAPRE2Q15555 327 aa13.12□□□□□ -0.31
CMTM1-217ENST00000533666 TBR1Q16650 682 aa13.12□□□□□ -0.31
CMTM1-217ENST00000533666 SPDYE7PQ495Y7 208 aa13.12□□□□□ -0.31
CMTM1-217ENST00000533666 AGKQ53H12 422 aa13.12□□□□□ -0.31
CMTM1-217ENST00000533666 ZNF385BQ569K4 471 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms