RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 GPR143P51810 404 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 AQP5P55064 265 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 SOX8P57073 446 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 C21orf58P58505 322 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 CBX3Q13185 183 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 PTGR1Q14914 329 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 KPNB1Q14974 876 aaKnown RBP11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 LSM12Q3MHD2 195 aaKnown RBP11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 SPATA19Q7Z5L4 167 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 TICAM1Q8IUC6 712 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 C7orf57Q8NEG2 295 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 RFWD2Q8NHY2 731 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 FER1L6-AS2Q96M78 137 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 TUBB6Q9BUF5 446 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 REEP4Q9H6H4 257 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 ZNF160Q9HCG1 818 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 FGFR1OP2Q9NVK5 253 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 PAIP2BQ9ULR5 123 aaKnown RBP11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 EIF3LQ9Y262 564 aaKnown RBP11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 NSG1A0A0A6YYJ2 146 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 SAGE2PA6NJ88 616 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 A8MUA0 341 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 ITGB2P05107 769 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 CELA2AP08217 269 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 CPMP14384 443 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 PIK3R1P27986 724 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 GALNSP34059 522 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 XKP51811 444 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 CLDN8P56748 225 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 SLC26A5P58743 744 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 CHAF1BQ13112 559 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 ELAVL1Q15717 326 aaKnown RBP11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 MPEG1Q2M385 716 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 LINC00303Q3SY05 128 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 ZNF385BQ569K4 471 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 FAM180BQ6P0A1 224 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 ST13P4Q8IZP2 240 aaPredicted RBP11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 FAM13CQ8NE31 585 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 CEP70Q8NHQ1 597 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 CDC26Q8NHZ8 85 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 NUDT8Q8WV74 236 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 TTC9Q92623 222 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 PPWD1Q96BP3 646 aaKnown RBP11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 VPS50Q96JG6 964 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 LPAR4Q99677 370 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 ING2Q9H160 280 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 DCLRE1BQ9H816 532 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 PNO1Q9NRX1 252 aaKnown RBP11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 AIG1Q9NVV5 245 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 ATP6V1HQ9UI12 483 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 UTS2RQ9UKP6 389 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 GPR45Q9Y5Y3 372 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 MED13Q9UHV7 2174 aa11.88□□□□□ -0.51
RPUSD4-208ENST00000533628 PKD1L2Q7Z442 2459 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 GABRR3A8MPY1 467 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 TPD52L2O43399 206 aaKnown RBP11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 AKAP10O43572 662 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 CEACAM4O75871 244 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 LRATO95237 230 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 RRADP55042 308 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 TMEM198Q66K66 360 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 PLAG1Q6DJT9 500 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 KRTCAP2Q8N6L1 136 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 APOBEC4Q8WW27 367 aaKnown RBP11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 GFM2Q969S9 779 aaKnown RBP11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 NR1H4Q96RI1 486 aaPredicted RBP11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 ATP13A2Q9NQ11 1180 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 SLC35C2Q9NQQ7 365 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 PSME2Q9UL46 239 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 MGAQ8IWI9 3026 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 MYO1GB0I1T2 1018 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 ERAL1O75616 437 aaKnown RBP11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 DNAJB5O75953 348 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 DDAH2O95865 285 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 PORP16435 677 aaPredicted RBP11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 CSNK2A2P19784 350 aaPredicted RBP11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 FEN1P39748 380 aaKnown RBP11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 MGAT2Q10469 447 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 AIMP2Q13155 320 aaKnown RBP11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 ANKRD26P1Q6NSI1 321 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 BORAQ6PGQ7 559 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 CCDC80Q76M96 950 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 APCDD1LQ8NCL9 501 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 SUN3Q8TAQ9 357 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 M1APQ8TC57 530 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 PSMF1Q92530 271 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 EXTL1Q92935 676 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 EXOSC8Q96B26 276 aaKnown RBP11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 MTERF3Q96E29 417 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 DGAT2Q96PD7 388 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 PELOQ9BRX2 385 aaKnown RBP11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 NPHS2Q9NP85 383 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 RHBDL2Q9NX52 303 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 ZNF223Q9UK11 482 aaPredicted RBP11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 ITGB1BP2Q9UKP3 347 aa11.87□□□□□ -0.51
RPUSD4-208ENST00000533628 DSPP15924 2871 aaKnown RBP11.86□□□□□ -0.51
RPUSD4-208ENST00000533628 SCAMP2O15127 329 aaKnown RBP11.86□□□□□ -0.51
RPUSD4-208ENST00000533628 IFNA16P05015 189 aa11.86□□□□□ -0.51
RPUSD4-208ENST00000533628 ATP1B1P05026 303 aa11.86□□□□□ -0.51
RPUSD4-208ENST00000533628 SERPINA7P05543 415 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms