RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 EBPQ15125 230 aaKnown RBP14.24□□□□□ -0.13
CPSF1-211ENST00000533492 HYAL4Q2M3T9 481 aa14.24□□□□□ -0.13
CPSF1-211ENST00000533492 PRAMEF20Q5VT98 475 aa14.24□□□□□ -0.13
CPSF1-211ENST00000533492 LETMD1Q6P1Q0 360 aa14.24□□□□□ -0.13
CPSF1-211ENST00000533492 TRILQ7L0X0 811 aa14.24□□□□□ -0.13
CPSF1-211ENST00000533492 TMEM151AQ8N4L1 468 aa14.24□□□□□ -0.13
CPSF1-211ENST00000533492 OR5M3Q8NGP4 307 aa14.24□□□□□ -0.13
CPSF1-211ENST00000533492 PAQR8Q8TEZ7 354 aa14.24□□□□□ -0.13
CPSF1-211ENST00000533492 ASB5Q8WWX0 329 aa14.24□□□□□ -0.13
CPSF1-211ENST00000533492 RND1Q92730 232 aa14.24□□□□□ -0.13
CPSF1-211ENST00000533492 C1QTNF3Q9BXJ4 246 aa14.24□□□□□ -0.13
CPSF1-211ENST00000533492 CXorf21Q9HAI6 301 aa14.24□□□□□ -0.13
CPSF1-211ENST00000533492 BRF2Q9HAW0 419 aa14.24□□□□□ -0.13
CPSF1-211ENST00000533492 FARSBQ9NSD9 589 aaKnown RBP14.24□□□□□ -0.13
CPSF1-211ENST00000533492 CNIH4Q9P003 139 aa14.24□□□□□ -0.13
CPSF1-211ENST00000533492 TRPS1Q9UHF7 1281 aa14.24□□□□□ -0.13
CPSF1-211ENST00000533492 BOKQ9UMX3 212 aaPredicted RBP14.24□□□□□ -0.13
CPSF1-211ENST00000533492 NINQ8N4C6 2090 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 A0A1B0GTL3 188 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 C1orf226A1L170 272 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 C19orf84I3L1E1 186 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 TP53I11O14683 189 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 BCKDKO14874 412 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 RIPK2O43353 540 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 OR4F21O95013 312 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 IGHG3P01860 377 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 SBK3P0C264 359 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 FBXO45P0C2W1 286 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 RHOXF2BP0C7M4 288 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 PORP16435 677 aaPredicted RBP14.23□□□□□ -0.13
CPSF1-211ENST00000533492 SSTR4P31391 388 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 PMPCAQ10713 525 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 FOXO1Q12778 655 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 ZNF585AQ6P3V2 769 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 LYPD8Q6UX82 237 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 ACAD11Q709F0 780 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 COMMD6Q7Z4G1 85 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 LCA5Q86VQ0 697 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 FBXW8Q8N3Y1 598 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 OR10G3Q8NGC4 313 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 OR5M9Q8NGP3 310 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 TP53INP1Q96A56 240 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 JSRP1Q96MG2 331 aaPredicted RBP14.23□□□□□ -0.13
CPSF1-211ENST00000533492 RHOXF2Q9BQY4 288 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 OR10A5Q9H207 317 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 SH2D2AQ9NP31 389 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 ZFP64Q9NPA5 681 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 PNPLA3Q9NST1 481 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 TMEM216Q9P0N5 145 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 ACAD8Q9UKU7 415 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 PSME2Q9UL46 239 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 PCDHA9Q9Y5H5 950 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 LIPGQ9Y5X9 500 aa14.23□□□□□ -0.13
CPSF1-211ENST00000533492 LRBAP50851 2863 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 ABCA12Q86UK0 2595 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 TRGV5A0A0B4J1U4 118 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 A0A1W2PS29 197 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 GOLGA6L10A6NI86 522 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 FIGNL2A6NMB9 653 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 SUSD5O60279 629 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 ERAL1O75616 437 aaKnown RBP14.22□□□□□ -0.13
CPSF1-211ENST00000533492 KRT6AP02538 564 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 KRT6BP04259 564 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 CPMP14384 443 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 ATP5F1P24539 256 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-211ENST00000533492 GCAP28676 217 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 KIR3DL1P43629 444 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 KRT6CP48668 564 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 NRG3P56975 720 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 FUT7Q11130 342 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 RASA2Q15283 850 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 UNC50Q53HI1 259 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 EMC4Q5J8M3 183 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 ZNF678Q5SXM1 525 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 MARVELD2Q8N4S9 558 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 CDYL2Q8N8U2 506 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 OR7G1Q8NGA0 311 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 DIO2Q92813 273 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 SARAFQ96BY9 339 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 DOHHQ9BU89 302 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 FAIM2Q9BWQ8 316 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 ALKBH4Q9NXW9 302 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 VPS29Q9UBQ0 182 aa14.22□□□□□ -0.13
CPSF1-211ENST00000533492 A0A1B0GVC2 190 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 GOLGA8RI6L899 631 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 AQP7O14520 342 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 DLX3O60479 287 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 HCN1O60741 890 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 ULK1O75385 1050 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 ESRRBO95718 433 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 CLPSP04118 112 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 CELA3AP09093 270 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 CT62P0C5K7 136 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 CSNK2A2P19784 350 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-211ENST00000533492 IMPDH1P20839 514 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 ACVR2AP27037 513 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 HMOX2P30519 316 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 CHRNB4P30926 498 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 ALDH9A1P49189 494 aa14.21□□□□□ -0.13
CPSF1-211ENST00000533492 TMED10P49755 219 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms