RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 SLC6A19Q695T7 634 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 FAM111BQ6SJ93 734 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 HSDL2Q6YN16 418 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 C9orf40Q8IXQ3 194 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 SAMD14Q8IZD0 417 aaPredicted RBP11.14□□□□□ -0.63
SSBP3-214ENST00000533209 BEST3Q8N1M1 668 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 TEX19Q8NA77 164 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 OR8K3Q8NH51 312 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 SUN3Q8TAQ9 357 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 THAP3Q8WTV1 239 aaPredicted RBP11.14□□□□□ -0.63
SSBP3-214ENST00000533209 DYDC1Q8WWB3 177 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 HAS2Q92819 552 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 CTHRC1Q96CG8 243 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 ZNF764Q96H86 408 aaPredicted RBP11.14□□□□□ -0.63
SSBP3-214ENST00000533209 ART5Q96L15 291 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 REEP4Q9H6H4 257 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 SLCO1B3Q9NPD5 702 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 MIEF1Q9NQG6 463 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 ASIC5Q9NY37 505 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 MAT2BQ9NZL9 334 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 COPS7AQ9UBW8 275 aa11.14□□□□□ -0.63
SSBP3-214ENST00000533209 CNTRLQ7Z7A1 2325 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 DYTNA2CJ06 578 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 TRPC5OSA6NMA1 111 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 GABRR3A8MPY1 467 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 B8ZZF3 427 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 ZNF195O14628 629 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 VPS4BO75351 444 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 F10P00742 488 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 PRPS2P11908 318 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 SSTR4P31391 388 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 ST13P50502 369 aaKnown RBP11.13□□□□□ -0.63
SSBP3-214ENST00000533209 DIO3P55073 304 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 RNF4P78317 190 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 ARG2P78540 354 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 MAP4K2Q12851 820 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 MAD2L1Q13257 205 aaPredicted RBP11.13□□□□□ -0.63
SSBP3-214ENST00000533209 PDE7AQ13946 482 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 PTGR1Q14914 329 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 MPEG1Q2M385 716 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 PLEKHN1Q494U1 663 aaPredicted RBP11.13□□□□□ -0.63
SSBP3-214ENST00000533209 HSP90B2PQ58FF3 399 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 ANKRD26P1Q6NSI1 321 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 C16orf47Q6ZP98 133 aaPredicted RBP11.13□□□□□ -0.63
SSBP3-214ENST00000533209 Q6ZS92 163 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 LARP4Q71RC2 724 aaKnown RBP eCLIP11.13□□□□□ -0.63
SSBP3-214ENST00000533209 MAVSQ7Z434 540 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 CCDC116Q8IYX3 515 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 LRRC34Q8IZ02 419 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 CATSPER1Q8NEC5 780 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 ADCY4Q8NFM4 1077 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 PIWIL2Q8TC59 973 aaKnown RBP11.13□□□□□ -0.63
SSBP3-214ENST00000533209 ZNF675Q8TD23 568 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 PNPLA2Q96AD5 504 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 BBS4Q96RK4 519 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 WDR55Q9H6Y2 383 aaPredicted RBP11.13□□□□□ -0.63
SSBP3-214ENST00000533209 LIN28AQ9H9Z2 209 aaKnown RBP11.13□□□□□ -0.63
SSBP3-214ENST00000533209 MED4Q9NPJ6 270 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 SLAMF7Q9NQ25 335 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 GIMAP4Q9NUV9 329 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 NOP53Q9NZM5 478 aaKnown RBP11.13□□□□□ -0.63
SSBP3-214ENST00000533209 ATP6V1HQ9UI12 483 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 ZNF639Q9UID6 485 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 ANAPC2Q9UJX6 822 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 ENTPD4Q9Y227 616 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 EIF3LQ9Y262 564 aaKnown RBP11.13□□□□□ -0.63
SSBP3-214ENST00000533209 B3GNT3Q9Y2A9 372 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 ZNF462Q96JM2 2506 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 BSNQ9UPA5 3926 aa11.13□□□□□ -0.63
SSBP3-214ENST00000533209 GOLGA8QA0A0J9YX86 632 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 GOLGA8OA6NCC3 632 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 OR5H15A6NDH6 313 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 OR6C76A6NM76 312 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 GOLGA8NF8WBI6 632 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 SCAMP2O15127 329 aaKnown RBP11.12□□□□□ -0.63
SSBP3-214ENST00000533209 SUV39H1O43463 412 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 SORBS2O94875 1100 aaKnown RBP11.12□□□□□ -0.63
SSBP3-214ENST00000533209 CBX7O95931 251 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 G6PDP11413 515 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 PCSK2P16519 638 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 LBPP18428 481 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 EPHA3P29320 983 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 MPIP34949 423 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 TRHRP34981 398 aaPredicted RBP11.12□□□□□ -0.63
SSBP3-214ENST00000533209 CD96P40200 585 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 TNFSF10P50591 281 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 DUSP8Q13202 625 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 TUBA3CQ13748 450 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 SLC9B1Q4ZJI4 515 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 TRMT12Q53H54 448 aaKnown RBP11.12□□□□□ -0.63
SSBP3-214ENST00000533209 ZNF628Q5EBL2 1059 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 C6orf163Q5TEZ5 329 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 ZNF468Q5VIY5 522 aaPredicted RBP11.12□□□□□ -0.63
SSBP3-214ENST00000533209 OGFOD2Q6N063 350 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 TUBA3EQ6PEY2 450 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 RNF111Q6ZNA4 994 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 RGS9BPQ6ZS82 235 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 RIMKLAQ8IXN7 391 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 FAM9CQ8IZT9 166 aa11.12□□□□□ -0.63
SSBP3-214ENST00000533209 VWA5B2Q8N398 1253 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms