RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 OTCP00480 354 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 TFP02787 698 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 ALPPP05187 535 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 DGKGP49619 791 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 CLCN4P51793 760 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 ABHD18Q0P651 414 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 RNF212Q495C1 297 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 TECRLQ5HYJ1 363 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 PDSS1Q5T2R2 415 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 NADSYN1Q6IA69 706 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 TRNP1Q6NT89 227 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 PARM1Q6UWI2 310 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 CD300LGQ6UXG3 332 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 Q6ZVU0 165 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 TMEM135Q86UB9 458 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 CDH26Q8IXH8 852 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 STK40Q8N2I9 435 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 DENND6BQ8NEG7 585 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 DNAJB8Q8NHS0 232 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 MAFAQ8NHW3 353 aaPredicted RBP6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 C2CD4CQ8TF44 421 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF566Q969W8 418 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF251Q9BRH9 671 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 C7orf50Q9BRJ6 194 aaKnown RBP6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 MED18Q9BUE0 208 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 REEP4Q9H6H4 257 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 PPP4R1LQ9P1A2 415 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 ASH2LQ9UBL3 628 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 KIF25Q9UIL4 384 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 CD207Q9UJ71 328 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 SCML2Q9UQR0 700 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 YARS2Q9Y2Z4 477 aaKnown RBP6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 ASB4Q9Y574 426 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 DNAJC15Q9Y5T4 150 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 PTGDR2Q9Y5Y4 395 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 MYO18AQ92614 2054 aaKnown RBP6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 OR2AT4A6NND4 320 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 TSTD3H0UI37 97 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 PCDH17O14917 1159 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 ARPC5O15511 151 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 PI15O43692 258 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 STC2O76061 302 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 CDK14O94921 469 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 JUNDP17535 347 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 PTPN3P26045 913 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 APEX1P27695 318 aaKnown RBP6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 FAUP35544 74 aaKnown RBP6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 IL2P60568 153 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 TNFRSF17Q02223 184 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 HYAL1Q12794 435 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 ARHGEF7Q14155 803 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 MFSD13AQ14CX5 517 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 DPYSL2Q16555 572 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 LEXMQ3ZCV2 418 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 XKR4Q5GH76 650 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 FAM78AQ5JUQ0 283 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 PRAMEF14Q5SWL7 426 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 ADGRF1Q5T601 910 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 SAXO2Q658L1 398 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 KANSL1Q7Z3B3 1105 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 ZER1Q7Z7L7 766 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 ANKRD46Q86W74 232 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 TCEAL8Q8IYN2 117 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 TMEM185AQ8NFB2 350 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 EXOSC8Q96B26 276 aaKnown RBP6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 TOE1Q96GM8 510 aaKnown RBP6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 SFXN2Q96NB2 322 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 OPALINQ96PE5 141 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 FN3KQ9H479 309 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 LDAHQ9H6V9 325 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 RNF167Q9H6Y7 350 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 LTB4R2Q9NPC1 389 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 GFOD1Q9NXC2 390 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 PADI2Q9Y2J8 665 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 A0A0X1KG70 313 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 LRRC72A6NJI9 287 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC31A1O15431 190 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 ADH1CP00326 375 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 HLA-DPB1P04440 258 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 CYP17A1P05093 508 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 COX7A2P14406 83 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 CBR1P16152 277 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 ETV6P41212 452 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 KIR2DL3P43628 341 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 CHRNA4P43681 627 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 MASP1P48740 699 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 BTG1P62324 171 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 CHAF1BQ13112 559 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 DDX39BQ13838 428 aaKnown RBP6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 PTGR1Q14914 329 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 CHRNA6Q15825 494 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 ZRANB3Q5FWF4 1079 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC25A25Q6KCM7 469 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 CXorf57Q6NSI4 855 aaKnown RBP6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 C3orf33Q6P1S2 294 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 NCEH1Q6PIU2 408 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 WASH2PQ6VEQ5 465 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 SYT12Q8IV01 421 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 FUNDC1Q8IVP5 155 aa6.48□□□□□ -1.37
TGFBR3-209ENST00000532540 RDH10Q8IZV5 341 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms