RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 OR4D2P58180 307 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 LRRC74AQ0VAA2 488 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 GAB1Q13480 694 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 RBM15BQ8NDT2 890 aaKnown RBP17.82■□□□□ 0.44
SMPD1-205ENST00000531303 OR2Y1Q8NGV0 311 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 RIT1Q92963 219 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 AURKBQ96GD4 344 aaPredicted RBP17.82■□□□□ 0.44
SMPD1-205ENST00000531303 TMEM121BQ9BXQ6 578 aaPredicted RBP17.82■□□□□ 0.44
SMPD1-205ENST00000531303 SEMA3GQ9NS98 782 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 VAPAQ9P0L0 249 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 ACSL6Q9UKU0 697 aa17.82■□□□□ 0.44
SMPD1-205ENST00000531303 DCHS1Q96JQ0 3298 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 WDFY3Q8IZQ1 3526 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 TCRBV16S1A1N1A0A5B0 115 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 ATP5HO75947 161 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 C1QCP02747 245 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 ATP1B1P05026 303 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 UMODP07911 640 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 RAB40ALP0C0E4 278 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 CT62P0C5K7 136 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 ZNF267Q14586 743 aaPredicted RBP17.81■□□□□ 0.44
SMPD1-205ENST00000531303 MLC1Q15049 377 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 C6orf163Q5TEZ5 329 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 ANKRD37Q7Z713 158 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 MSRB3Q8IXL7 192 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 PNPT1Q8TCS8 783 aaKnown RBP17.81■□□□□ 0.44
SMPD1-205ENST00000531303 ROPN1LQ96C74 230 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 C8orf44Q96CB5 159 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 SLC7A6OSQ96CW6 309 aaPredicted RBP17.81■□□□□ 0.44
SMPD1-205ENST00000531303 ELP4Q96EB1 424 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 CGREF1Q99674 301 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 TRIM4Q9C037 500 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 SIRT3Q9NTG7 399 aaPredicted RBP17.81■□□□□ 0.44
SMPD1-205ENST00000531303 SLC25A37Q9NYZ2 338 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 TCFL5Q9UL49 500 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 WASF3Q9UPY6 502 aa17.81■□□□□ 0.44
SMPD1-205ENST00000531303 C17orf105B2RV13 164 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 FXYD1O00168 92 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 CD63P08962 238 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 PTPN4P29074 926 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 PTPN6P29350 595 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 CHI3L1P36222 383 aaPredicted RBP17.8■□□□□ 0.44
SMPD1-205ENST00000531303 CCT3P49368 545 aaKnown RBP17.8■□□□□ 0.44
SMPD1-205ENST00000531303 PRKAG1P54619 331 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 CASP9P55211 416 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 PSME3P61289 254 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 PRICKLE4Q2TBC4 344 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 TRMT12Q53H54 448 aaKnown RBP17.8■□□□□ 0.44
SMPD1-205ENST00000531303 SFT2D3Q587I9 215 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 ZNF628Q5EBL2 1059 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 LRIF1Q5T3J3 769 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 ANGPTL8Q6UXH0 198 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 GALNT12Q8IXK2 581 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 SIMC1Q8NDZ2 872 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 OR7G2Q8NG99 324 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 GOT1L1Q8NHS2 421 aaPredicted RBP17.8■□□□□ 0.44
SMPD1-205ENST00000531303 PELOQ9BRX2 385 aaKnown RBP17.8■□□□□ 0.44
SMPD1-205ENST00000531303 SLC35A5Q9BS91 424 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 CNPPD1Q9BV87 410 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 CXorf21Q9HAI6 301 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 NEUROD4Q9HD90 331 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 TAS2R1Q9NYW7 299 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 MAT2BQ9NZL9 334 aa17.8■□□□□ 0.44
SMPD1-205ENST00000531303 MRPS18BQ9Y676 258 aaKnown RBP17.8■□□□□ 0.44
SMPD1-205ENST00000531303 RNF103-CHMP3A0A140T963 221 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 C21orf140B9A014 251 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.79■□□□□ 0.44
SMPD1-205ENST00000531303 HRKO00198 91 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 GYG2O15488 501 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 NME6O75414 186 aaPredicted RBP17.79■□□□□ 0.44
SMPD1-205ENST00000531303 UQCRC2P22695 453 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 OTX2P32243 289 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 CPOXP36551 454 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 NCALDP61601 193 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 EEF1A2Q05639 463 aaKnown RBP17.79■□□□□ 0.44
SMPD1-205ENST00000531303 MGAT2Q10469 447 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 BIKQ13323 160 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 TP53BP2Q13625 1128 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 EXOSC7Q15024 291 aaKnown RBP17.79■□□□□ 0.44
SMPD1-205ENST00000531303 CPZQ66K79 652 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 HACD2Q6Y1H2 254 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 ZNF771Q7L3S4 317 aaPredicted RBP17.79■□□□□ 0.44
SMPD1-205ENST00000531303 DTX1Q86Y01 620 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 DEFB107AQ8IZN7 70 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 TRIML2Q8N7C3 387 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 PTPMT1Q8WUK0 201 aaPredicted RBP17.79■□□□□ 0.44
SMPD1-205ENST00000531303 ZNF578Q96N58 590 aaPredicted RBP17.79■□□□□ 0.44
SMPD1-205ENST00000531303 GPN2Q9H9Y4 310 aaPredicted RBP17.79■□□□□ 0.44
SMPD1-205ENST00000531303 C3orf14Q9HBI5 128 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 ADAP2Q9NPF8 381 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 ZCCHC3Q9NUD5 404 aaKnown RBP17.79■□□□□ 0.44
SMPD1-205ENST00000531303 IL17BQ9UHF5 180 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 CLCA3PQ9Y6N3 262 aa17.79■□□□□ 0.44
SMPD1-205ENST00000531303 LIPCP11150 499 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 MTPNP58546 118 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 SELPLGQ14242 412 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 ELAVL1Q15717 326 aaKnown RBP17.78■□□□□ 0.44
SMPD1-205ENST00000531303 TBC1D25Q3MII6 688 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 LACTB2Q53H82 288 aaPredicted RBP17.78■□□□□ 0.44
SMPD1-205ENST00000531303 RUNDC3AQ59EK9 446 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms