RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 SLC15A4Q8N697 577 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 ARIH2OSQ8N7S6 290 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.44□□□□□ -1.22
CD44-232ENST00000531118 CNEP1R1Q8N9A8 125 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 FAM83FQ8NEG4 500 aaPredicted RBP7.44□□□□□ -1.22
CD44-232ENST00000531118 TRPV3Q8NET8 790 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 SLC5A11Q8WWX8 675 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 ATL1Q8WXF7 558 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 AKAP1Q92667 903 aaKnown RBP eCLIP7.44□□□□□ -1.22
CD44-232ENST00000531118 KCNJ9Q92806 393 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 DIO2Q92813 273 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 STARD4Q96DR4 205 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 OR4K3Q96R72 315 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 ALOXE3Q9BYJ1 711 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 ESRP2Q9H6T0 727 aaKnown RBP7.44□□□□□ -1.22
CD44-232ENST00000531118 PELI2Q9HAT8 420 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 KLHL42Q9P2K6 505 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 VTI1BQ9UEU0 232 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 MAGED1Q9Y5V3 778 aaPredicted RBP7.44□□□□□ -1.22
CD44-232ENST00000531118 RYR3Q15413 4870 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 BTNL10A8MVZ5 291 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 E7EVH7 732 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 GOLGA6L22H0YM25 854 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 CYR61O00622 381 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 UBFD1O14562 309 aaKnown RBP7.43□□□□□ -1.22
CD44-232ENST00000531118 ERI3O43414 337 aaKnown RBP7.43□□□□□ -1.22
CD44-232ENST00000531118 KLF4O43474 513 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 B3GALT2O43825 422 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 NDUFS7O75251 213 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 TJP3O95049 919 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 VAPBO95292 243 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 IGKV3-11P04433 115 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 CRHP06850 196 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 DANCRP0C864 163 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 CPN1P15169 458 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 TNNI3P19429 210 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 CHMP24386 653 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 CERS1P27544 350 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 PTPN6P29350 595 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 SERPINB3P29508 390 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 CDC25BP30305 580 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 HNRNPH1P31943 449 aaKnown RBP7.43□□□□□ -1.22
CD44-232ENST00000531118 RPL22P35268 128 aaKnown RBP7.43□□□□□ -1.22
CD44-232ENST00000531118 GCKP35557 465 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 MSH2P43246 934 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 SLC6A12P48065 614 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 KCNJ5P48544 419 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 LIM2P55344 173 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 SESN2P58004 480 aaPredicted RBP7.43□□□□□ -1.22
CD44-232ENST00000531118 STXBP1P61764 594 aaKnown RBP7.43□□□□□ -1.22
CD44-232ENST00000531118 SIRPAP78324 504 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 ID2Q02363 134 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 SRYQ05066 204 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 PCDH1Q08174 1060 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 SERTAD2Q14140 314 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 SPRED3Q2MJR0 410 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 FAM174BQ3ZCQ3 159 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 LIPNQ5VXI9 398 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 ANKRD34AQ69YU3 496 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 CES3Q6UWW8 571 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 SH2D5Q6ZV89 423 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 CENPUQ71F23 418 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 SDCCAG8Q86SQ7 713 aaPredicted RBP7.43□□□□□ -1.22
CD44-232ENST00000531118 TMPRSS11BQ86T26 416 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 KIAA1328Q86T90 577 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 YRDCQ86U90 279 aaKnown RBP7.43□□□□□ -1.22
CD44-232ENST00000531118 CILP2Q8IUL8 1156 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 SLC35B2Q8TB61 432 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 NEIL2Q969S2 332 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 FBXW5Q969U6 566 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 PYCR2Q96C36 320 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 MFSD3Q96ES6 412 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 PGM2Q96G03 612 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 PLPPR2Q96GM1 343 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 SNF8Q96H20 258 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 TMEM41AQ96HV5 264 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 FAR2Q96K12 515 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 HS6ST2Q96MM7 605 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 TSNARE1Q96NA8 513 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 GNRHR2Q96P88 292 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 GBP4Q96PP9 640 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 TNFRSF13CQ96RJ3 184 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 DNAJC7Q99615 494 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 GPR21Q99679 349 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 NAT10Q9H0A0 1025 aaKnown RBP7.43□□□□□ -1.22
CD44-232ENST00000531118 MRPL18Q9H0U6 180 aaKnown RBP7.43□□□□□ -1.22
CD44-232ENST00000531118 EIF2B3Q9NR50 452 aaKnown RBP7.43□□□□□ -1.22
CD44-232ENST00000531118 TEX10Q9NXF1 929 aaPredicted RBP7.43□□□□□ -1.22
CD44-232ENST00000531118 ELOVL5Q9NYP7 299 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 FETUBQ9UGM5 382 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 INTUQ9ULD6 942 aa7.43□□□□□ -1.22
CD44-232ENST00000531118 A0A088AWK7 358 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 HRKO00198 91 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 TP53I11O14683 189 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 CTNSO60931 367 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 LDB3O75112 727 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 TGM6O95932 706 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 IGHA1P01876 353 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 C8GP07360 202 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 IGHV4-31P0DP07 118 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms