RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 RAB11FIP2Q7L804 512 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 TMEM135Q86UB9 458 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 ZNF584Q8IVC4 421 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 SPAG16Q8N0X2 631 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 IL17FQ96PD4 163 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 MROQ9BYG7 248 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 PARPBPQ9NWS1 579 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 PCDH10Q9P2E7 1040 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 EXTL2Q9UBQ6 330 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 NWD2Q9ULI1 1742 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 A6NCN8 305 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 SOBPA7XYQ1 873 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 ANHXE9PGG2 379 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 E2F3O00716 465 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 ZNF806P0C7X5 589 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 BMPR1AP36894 532 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 GJA8P48165 433 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 RIDAP52758 137 aaKnown RBP8.1□□□□□ -1.11
CTNND1-227ENST00000530748 PITX1P78337 314 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-227ENST00000530748 CLDN10P78369 228 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 ZNF33BQ06732 778 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 RHEBQ15382 184 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 PLXDC1Q8IUK5 500 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 C12orf76Q8N812 135 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-227ENST00000530748 FBXL8Q96CD0 374 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 PGAM5Q96HS1 289 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 FN3KQ9H479 309 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 RDH8Q9NYR8 311 aa8.1□□□□□ -1.11
CTNND1-227ENST00000530748 NUFIP1Q9UHK0 495 aaKnown RBP8.1□□□□□ -1.11
CTNND1-227ENST00000530748 DDX60Q8IY21 1712 aaKnown RBP8.09□□□□□ -1.11
CTNND1-227ENST00000530748 RP2O75695 350 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 SNAP29O95721 258 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 GTF2F2P13984 249 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 ZNF182P17025 639 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-227ENST00000530748 GRIK2Q13002 908 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 MOGSQ13724 837 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 GAS6Q14393 721 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 RAET1LQ5VY80 246 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 GPR150Q8NGU9 434 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 SLC45A3Q96JT2 553 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 OR1F2PQ96R84 312 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 ACTRT3Q9BYD9 372 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 PCTPQ9UKL6 214 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 CNOT11Q9UKZ1 510 aaKnown RBP8.09□□□□□ -1.11
CTNND1-227ENST00000530748 TMEM14AQ9Y6G1 99 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 SLC22A31A6NKX4 558 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 GJE1A6NN92 205 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 M0R036 132 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 SLC33A1O00400 549 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-227ENST00000530748 HSPA12AO43301 675 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 PRAMEF2O60811 474 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 ERCC1P07992 297 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-227ENST00000530748 CTSAP10619 480 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 CKMT1AP12532 417 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 ADH7P40394 386 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 MAN2A2P49641 1150 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 HK3P52790 923 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 ALG10Q5BKT4 473 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 BCL2L15Q5TBC7 163 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 LIPKQ5VXJ0 399 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 C6orf89Q6UWU4 347 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 CEACAM19Q7Z692 300 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 RTP4Q96DX8 246 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 MUS81Q96NY9 551 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 FAM118AQ9NWS6 357 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 ISPDA4D126 451 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 FTCDNL1E5RQL4 147 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 SOCS2O14508 198 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 AXIN1O15169 862 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 HRGP04196 525 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 AK4P27144 223 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-227ENST00000530748 PTGS2P35354 604 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 CRYZQ08257 329 aaKnown RBP8.09□□□□□ -1.11
CTNND1-227ENST00000530748 CDK10Q15131 360 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 GRK1Q15835 563 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 DEFB134Q4QY38 66 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 CLLU1OSQ5K130 101 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 PM20D1Q6GTS8 502 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 XKRXQ6PP77 449 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 FIGLAQ6QHK4 219 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 ENPP6Q6UWR7 440 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 ZNF852Q6ZMS4 543 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.09□□□□□ -1.111e-8■■■□□ 16
CTNND1-227ENST00000530748 ZNF100Q8IYN0 542 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 OR8K3Q8NH51 312 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 NEIL3Q8TAT5 605 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 SLC41A3Q96GZ6 507 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 DPH2Q9BQC3 489 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-227ENST00000530748 CCDC86Q9H6F5 360 aaKnown RBP8.09□□□□□ -1.11
CTNND1-227ENST00000530748 NUP50Q9UKX7 468 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 RARRES3Q9UL19 164 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 HCN2Q9UL51 889 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-227ENST00000530748 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-227ENST00000530748 K7ERQ8 282 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 SNNO75324 88 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-227ENST00000530748 PENKP01210 267 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-227ENST00000530748 ATF4P18848 351 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-227ENST00000530748 HOXA11P31270 313 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-227ENST00000530748 RBMXP38159 391 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms