RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	OR52E6	Q96RD3	313 aa		13.82	□□□□□ -0.2
NR1H3-231	ENST00000529540	HBEGF	Q99075	208 aa		13.82	□□□□□ -0.2
NR1H3-231	ENST00000529540	CTRC	Q99895	268 aa		13.82	□□□□□ -0.2
NR1H3-231	ENST00000529540	ACAT2	Q9BWD1	397 aa		13.82	□□□□□ -0.2
NR1H3-231	ENST00000529540	ALOXE3	Q9BYJ1	711 aa		13.82	□□□□□ -0.2
NR1H3-231	ENST00000529540	KLHL25	Q9H0H3	589 aa		13.82	□□□□□ -0.2
NR1H3-231	ENST00000529540	SERHL	Q9NQF3	203 aa		13.82	□□□□□ -0.2
NR1H3-231	ENST00000529540	SNX6	Q9UNH7	406 aa		13.82	□□□□□ -0.2
NR1H3-231	ENST00000529540	ERVK-11	Q9UQG0	969 aa		13.82	□□□□□ -0.2
NR1H3-231	ENST00000529540	GMPPB	Q9Y5P6	360 aa		13.82	□□□□□ -0.2
NR1H3-231	ENST00000529540	WDFY4	Q6ZS81	3184 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	CPED1	A4D0V7	1026 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540		E7EQ34	232 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540		H0YIV9	168 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	UPK1B	O75841	260 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	CD59	P13987	128 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	EPOR	P19235	508 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	PSMB9	P28065	219 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	PEBP1	P30086	187 aa	Known RBP	13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	DAP	P51397	102 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	LIMK1	P53667	647 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	CLDN8	P56748	225 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	NCS1	P62166	190 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	TUBA1B	P68363	451 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	SELENBP1	Q13228	472 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	ILK	Q13418	452 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	ZNF181	Q2M3W8	571 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	OR2T5	Q6IEZ7	315 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	TUBA1A	Q71U36	451 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	SLC22A16	Q86VW1	577 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	OR4K1	Q8NGD4	311 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	OR2T29	Q8NH02	315 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	IFI44	Q8TCB0	444 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	JPH3	Q8WXH2	748 aa	Predicted RBP	13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	RSC1A1	Q92681	617 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	RIBC2	Q9H4K1	309 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	NT5DC2	Q9H857	520 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	PARD6A	Q9NPB6	346 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	C1GALT1	Q9NS00	363 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	SPHK1	Q9NYA1	384 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	TSC22D4	Q9Y3Q8	395 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	ANKRD12	Q6UB98	2062 aa		13.81	□□□□□ -0.2
NR1H3-231	ENST00000529540	LY6G6E	A0A0G2JKS1	128 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	TLCD2	A6NGC4	264 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	TOX3	O15405	576 aa	Predicted RBP	13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	TNFSF14	O43557	240 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	DPM1	O60762	260 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	FAM20B	O75063	409 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	PRPS2	P11908	318 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	TYRP1	P17643	537 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	PTPN6	P29350	595 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	DNAJA1	P31689	397 aa	Known RBP	13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	ARHGDIA	P52565	204 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	DNASE1L3	Q13609	305 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	DOC2A	Q14183	400 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	KCNJ8	Q15842	424 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	PGS1	Q32NB8	556 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	MED27	Q6P2C8	311 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	GUSBP11	Q6P575	273 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	PLD3	Q8IV08	490 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	KRTCAP2	Q8N6L1	136 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	SLC38A4	Q969I6	547 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	LGALS12	Q96DT0	336 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	CCDC3	Q9BQI4	270 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	SARG	Q9BW04	601 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	MMP27	Q9H306	513 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	SEMA6C	Q9H3T2	930 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	ELOVL6	Q9H5J4	265 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	IL1RAP	Q9NPH3	570 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	BTBD3	Q9Y2F9	522 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540		U3KQA8	63 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	MN1	Q10571	1320 aa	Predicted RBP	13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	CABIN1	Q9Y6J0	2220 aa		13.8	□□□□□ -0.2
NR1H3-231	ENST00000529540	METTL15	A6NJ78	407 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	C4orf47	A7E2U8	309 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	CAPN5	O15484	640 aa	Predicted RBP	13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	MAN1A2	O60476	641 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	ULK1	O75385	1050 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	SEC22B	O75396	215 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	FADS2	O95864	444 aa	Known RBP	13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	GSN	P06396	782 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	BCKDHA	P12694	445 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	PSMB5	P28074	263 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	GSS	P48637	474 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	OR1D5	P58170	312 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	PPP1R8	Q12972	351 aa	Known RBP	13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	ADCK2	Q7Z695	626 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	FAM129C	Q86XR2	697 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	KMT5C	Q86Y97	462 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	SNX29P2	Q8IUI4	249 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	LYSMD2	Q8IV50	215 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	TTC29	Q8NA56	475 aa	Predicted RBP	13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	MCFD2	Q8NI22	146 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	TESC	Q96BS2	214 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	DPH7	Q9BTV6	452 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	NXF2	Q9GZY0	626 aa	Known RBP	13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	CHRNA10	Q9GZZ6	450 aa		13.79	□□□□□ -0.2
NR1H3-231	ENST00000529540	SLC6A13	Q9NSD5	602 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms