RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 KRT83P78385 493 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 CDK3Q00526 305 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 SIRPB2Q5JXA9 342 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 OTUD3Q5T2D3 398 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-212ENST00000529046 IRAK1BP1Q5VVH5 260 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 KRTAP5-1Q6L8H4 278 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 FBXL22Q6P050 247 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 TRIM65Q6PJ69 517 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 C11orf57Q6ZUT1 292 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-212ENST00000529046 KCTD8Q6ZWB6 473 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 SLC26A9Q7LBE3 791 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 BNIPLQ7Z465 357 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 SETD3Q86TU7 594 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-212ENST00000529046 TAC4Q86UU9 113 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 PTOV1Q86YD1 416 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 MMAAQ8IVH4 418 aaKnown RBP4.34□□□□□ -1.71
CSDE1-212ENST00000529046 GPALPP1Q8IXQ4 340 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 ZNF683Q8IZ20 524 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 APCDD1Q8J025 514 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 LGI2Q8N0V4 545 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 CNPY4Q8N129 248 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 CCAR2Q8N163 923 aaKnown RBP4.34□□□□□ -1.71
CSDE1-212ENST00000529046 CARNMT1Q8N4J0 409 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 METTL27Q8N6F8 245 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-212ENST00000529046 MOSPD2Q8NHP6 518 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 NELFBQ8WX92 580 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 SHC3Q92529 594 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 NXPE2Q96DL1 559 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 WBP1Q96G27 269 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 SERAC1Q96JX3 654 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 DGAT2Q96PD7 388 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 NODALQ96S42 347 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 CDRT15Q96T59 188 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 OMDQ99983 421 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 FEM1AQ9BSK4 669 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 MIS12Q9H081 205 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 CHMP1AQ9HD42 196 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-212ENST00000529046 UBE2TQ9NPD8 197 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-212ENST00000529046 NPAP1Q9NZP6 1156 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 RHCGQ9UBD6 479 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 CYTH4Q9UIA0 394 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 RWDD2AQ9UIY3 292 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 MAN1B1Q9UKM7 699 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 SLCO1B1Q9Y6L6 691 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 ADAMTS9Q9P2N4 1935 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 LAMA5O15230 3695 aa4.34□□□□□ -1.72
CSDE1-212ENST00000529046 ANKRD11Q6UB99 2663 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-212ENST00000529046 IGF2RP11717 2491 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 CACNA1GO43497 2377 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 PTPRBP23467 1997 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-212ENST00000529046 ILVBLA1L0T0 632 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 FAM172BPA6NC97 362 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 A8MV72 311 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-212ENST00000529046 PLOD3O60568 738 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 LETM1O95202 739 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-212ENST00000529046 IL1BP01584 269 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 DANCRP0C864 163 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 ERVPABLB-1P60509 514 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 ZNF177Q13360 481 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-212ENST00000529046 MFAP5Q13361 173 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 EXOC3L4Q17RC7 722 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 SLC25A52Q3SY17 297 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 PDSS1Q5T2R2 415 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 ALS2CLQ60I27 953 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 GPR139Q6DWJ6 353 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 TMCO3Q6UWJ1 677 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 GBP6Q6ZN66 633 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 ABI3BPQ7Z7G0 1075 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 FAM71AQ8IYT1 594 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 DEFB106AQ8N104 65 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 LSMEM2Q8N112 164 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 STK40Q8N2I9 435 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 MLKLQ8NB16 471 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 OR2A12Q8NGT7 310 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 GANCQ8TET4 914 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 OR8D1Q8WZ84 308 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 FGF11Q92914 225 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 ISG20Q96AZ6 181 aaKnown RBP4.33□□□□□ -1.72
CSDE1-212ENST00000529046 CNDP2Q96KP4 475 aaKnown RBP4.33□□□□□ -1.72
CSDE1-212ENST00000529046 CCDC114Q96M63 670 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 NAP1L5Q96NT1 182 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-212ENST00000529046 CPXM1Q96SM3 734 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 NPY6RQ99463 290 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 BTBD10Q9BSF8 475 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 ABHD6Q9BV23 337 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 PRORYQ9H606 182 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 DDIT4Q9NX09 232 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 IL17BQ9UHF5 180 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 XPO7Q9UIA9 1087 aaKnown RBP4.33□□□□□ -1.72
CSDE1-212ENST00000529046 ACAD8Q9UKU7 415 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 STAP1Q9ULZ2 295 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 CSNK1G3Q9Y6M4 447 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 DOCK7Q96N67 2140 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 LOC400499M0QZD8 3231 aa4.33□□□□□ -1.72
CSDE1-212ENST00000529046 ATRXP46100 2492 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 PRSS51A0A1B0GVH4 220 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 NEMP2A6NFY4 417 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 FAM47DPA6NHR8 397 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms