RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 TRDV1A0A1B0GX56 115 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 A0A1W2PRB8 838 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 CIB4A0PJX0 185 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 SOCS5O75159 536 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 NME6O75414 186 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-214ENST00000528165 DHFRP00374 187 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 STOMP27105 288 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 SLC6A1P30531 599 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 GPR176Q14439 515 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 GINS1Q14691 196 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 CLLU1OSQ5K130 101 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 AGTRAPQ6RW13 159 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 TMEM107Q6UX40 140 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 SERPINA13PQ6UXR4 307 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 UNC5DQ6UXZ4 953 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 TRILQ7L0X0 811 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 HDDC2Q7Z4H3 204 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 APOBEC4Q8WW27 367 aaKnown RBP13.91□□□□□ -0.18
CAPN1-214ENST00000528165 IRGMA1A4Y4 181 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 SH3BP5O60239 455 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 SLC19A2O60779 497 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 SOD1P00441 154 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 BCHEP06276 602 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 ATP1B2P14415 290 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-214ENST00000528165 ATF4P18848 351 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-214ENST00000528165 RPL3P39023 403 aaKnown RBP13.91□□□□□ -0.18
CAPN1-214ENST00000528165 ATN1P54259 1190 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-214ENST00000528165 CCL23P55773 120 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 RAB40BQ12829 278 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 MFSD13AQ14CX5 517 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 MPEG1Q2M385 716 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 COL28A1Q2UY09 1125 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 SLC25A30Q5SVS4 291 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 MORN1Q5T089 497 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 CD200R1LQ6Q8B3 271 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 RSPO2Q6UXX9 243 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-214ENST00000528165 ASB18Q6ZVZ8 466 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 COMMD6Q7Z4G1 85 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 LUZP2Q86TE4 346 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 NEIL3Q8TAT5 605 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 WBP2Q969T9 261 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 RNFT2Q96EX2 444 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 SENP5Q96HI0 755 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-214ENST00000528165 OR4K3Q96R72 315 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 AIFM2Q9BRQ8 373 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 EVA1BQ9NVM1 165 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 ZNF106Q9H2Y7 1883 aaKnown RBP13.9□□□□□ -0.18
CAPN1-214ENST00000528165 IGLV3-16A0A075B6K0 115 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 ZNF840PA6NDX5 716 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 SEMA7AO75326 666 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 ANXA3P12429 323 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 NAGAP17050 411 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 ENPP1P22413 925 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 MAPK8P45983 427 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 SMIM11AP58511 58 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 DUSP6Q16828 381 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 TMEM65Q6PI78 240 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 RFLNAQ6ZTI6 216 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 C16orf62Q7Z3J2 963 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 MARCH9Q86YJ5 346 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 HS6ST3Q8IZP7 471 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 TMED9Q9BVK6 235 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 GPR62Q9BZJ7 368 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 TBC1D17Q9HA65 648 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 EMC7Q9NPA0 242 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 ZFP64Q9NPA5 681 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 CLCA2Q9UQC9 943 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 OR51B4Q9Y5P0 310 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 ARHGEF33A8MVX0 844 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 MTX2O75431 263 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 RPLP2P05387 115 aaKnown RBP13.9□□□□□ -0.18
CAPN1-214ENST00000528165 ACP2P11117 423 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 CFL1P23528 166 aaKnown RBP13.9□□□□□ -0.18
CAPN1-214ENST00000528165 OPRD1P41143 372 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 SOX9P48436 509 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 GIPRP48546 466 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 MPPE1Q53F39 396 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 RETSATQ6NUM9 610 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 MED27Q6P2C8 311 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 KCTD20Q7Z5Y7 419 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 ZNF655Q8N720 491 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-214ENST00000528165 DCAF4L2Q8NA75 395 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 GALNT11Q8NCW6 608 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 TOR1AIP2Q8NFQ8 470 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 GPR32P1Q8NGA4 272 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 SLC7A13Q8TCU3 470 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 NLNQ9BYT8 704 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 CLEC4MQ9H2X3 399 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-214ENST00000528165 EXTL2Q9UBQ6 330 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 DOCK3Q8IZD9 2030 aa13.9□□□□□ -0.18
CAPN1-214ENST00000528165 GTPBP1O00178 669 aaKnown RBP13.89□□□□□ -0.19
CAPN1-214ENST00000528165 SAP18O00422 153 aaKnown RBP13.89□□□□□ -0.19
CAPN1-214ENST00000528165 AKAP8O43823 692 aaKnown RBP13.89□□□□□ -0.19
CAPN1-214ENST00000528165 IFNA7P01567 189 aa13.89□□□□□ -0.19
CAPN1-214ENST00000528165 TP53P04637 393 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-214ENST00000528165 SERPINA4P29622 427 aa13.89□□□□□ -0.19
CAPN1-214ENST00000528165 TALDO1P37837 337 aa13.89□□□□□ -0.19
CAPN1-214ENST00000528165 IKZF1Q13422 519 aa13.89□□□□□ -0.19
CAPN1-214ENST00000528165 SNTA1Q13424 505 aa13.89□□□□□ -0.19
CAPN1-214ENST00000528165 PDE7AQ13946 482 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms