RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 PLD6Q8N2A8 252 aaKnown RBP9.71□□□□□ -0.86
CPSF1-203ENST00000527916 NOA1Q8NC60 698 aaKnown RBP9.71□□□□□ -0.86
CPSF1-203ENST00000527916 PSD4Q8NDX1 1056 aa9.71□□□□□ -0.86
CPSF1-203ENST00000527916 SIMC1Q8NDZ2 872 aa9.71□□□□□ -0.86
CPSF1-203ENST00000527916 OR2M7Q8NG81 312 aa9.71□□□□□ -0.86
CPSF1-203ENST00000527916 SLC2A12Q8TD20 617 aa9.71□□□□□ -0.86
CPSF1-203ENST00000527916 ZNF721Q8TF20 911 aa9.71□□□□□ -0.86
CPSF1-203ENST00000527916 IFT81Q8WYA0 676 aa9.71□□□□□ -0.86
CPSF1-203ENST00000527916 RNASE6Q93091 150 aaKnown RBP9.71□□□□□ -0.86
CPSF1-203ENST00000527916 SARAFQ96BY9 339 aa9.71□□□□□ -0.86
CPSF1-203ENST00000527916 MTERF1Q99551 399 aaKnown RBP9.71□□□□□ -0.86
CPSF1-203ENST00000527916 NTMT1Q9BV86 223 aa9.71□□□□□ -0.86
CPSF1-203ENST00000527916 VPS11Q9H270 941 aa9.71□□□□□ -0.86
CPSF1-203ENST00000527916 OR51B5Q9H339 312 aa9.71□□□□□ -0.86
CPSF1-203ENST00000527916 LDAHQ9H6V9 325 aa9.71□□□□□ -0.86
CPSF1-203ENST00000527916 RPF2Q9H7B2 306 aaKnown RBP9.71□□□□□ -0.86
CPSF1-203ENST00000527916 DDX31Q9H8H2 851 aaKnown RBP9.71□□□□□ -0.86
CPSF1-203ENST00000527916 HPF1Q9NWY4 346 aa9.71□□□□□ -0.86
CPSF1-203ENST00000527916 ALKBH4Q9NXW9 302 aa9.71□□□□□ -0.86
CPSF1-203ENST00000527916 PHF11Q9UIL8 331 aa9.71□□□□□ -0.86
CPSF1-203ENST00000527916 IKBKGQ9Y6K9 419 aa9.71□□□□□ -0.86
CPSF1-203ENST00000527916 A0A087WUV0 522 aaPredicted RBP9.7□□□□□ -0.86
CPSF1-203ENST00000527916 A0A1B0GVC2 190 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 SAP18O00422 153 aaKnown RBP9.7□□□□□ -0.86
CPSF1-203ENST00000527916 AQP7O14520 342 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 SUSD5O60279 629 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 OR2J2O76002 312 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 SIX3O95343 332 aaPredicted RBP9.7□□□□□ -0.86
CPSF1-203ENST00000527916 CLDN9O95484 217 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 ACSL3O95573 720 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 IGHG3P01860 377 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 EPXP11678 715 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 COX7A2P14406 83 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 TACR1P25103 407 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 GALNSP34059 522 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 BSGP35613 385 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 BUD31P41223 144 aaPredicted RBP9.7□□□□□ -0.86
CPSF1-203ENST00000527916 STT3AP46977 705 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 MAN2A2P49641 1150 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 ASCL1P50553 236 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 HK2P52789 917 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 RPS13P62277 151 aaKnown RBP9.7□□□□□ -0.86
CPSF1-203ENST00000527916 RNF4P78317 190 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 TNFRSF17Q02223 184 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 CPSF6Q16630 551 aaKnown RBP eCLIP9.7□□□□□ -0.86
CPSF1-203ENST00000527916 MPEG1Q2M385 716 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 UBAP2Q5T6F2 1119 aaKnown RBP9.7□□□□□ -0.86
CPSF1-203ENST00000527916 LGSNQ5TDP6 509 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 TRILQ7L0X0 811 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 KIF18BQ86Y91 864 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 MYLK4Q86YV6 388 aaPredicted RBP9.7□□□□□ -0.86
CPSF1-203ENST00000527916 P3H2Q8IVL5 708 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 FAM109AQ8N4B1 249 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 SLC15A4Q8N697 577 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 GOLM1Q8NBJ4 401 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 NUBPLQ8TB37 319 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 DCAKDQ8WVC6 231 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 ASB15Q8WXK1 588 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 ZNF592Q92610 1267 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 RBM18Q96H35 190 aaKnown RBP9.7□□□□□ -0.86
CPSF1-203ENST00000527916 SENP5Q96HI0 755 aaPredicted RBP9.7□□□□□ -0.86
CPSF1-203ENST00000527916 COX4I2Q96KJ9 171 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 SGCZQ96LD1 299 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 DGAT2Q96PD7 388 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 RASL10BQ96S79 203 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 PAFAH2Q99487 392 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 PELOQ9BRX2 385 aaKnown RBP9.7□□□□□ -0.86
CPSF1-203ENST00000527916 ZNF717Q9BY31 904 aaPredicted RBP9.7□□□□□ -0.86
CPSF1-203ENST00000527916 TTTY12Q9BZ98 90 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 OR8D2Q9GZM6 311 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 EXO5Q9H790 373 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 PLEKHF2Q9H8W4 249 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 DEPPQ9NTK1 212 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 LYARQ9NX58 379 aaKnown RBP9.7□□□□□ -0.86
CPSF1-203ENST00000527916 CPSF2Q9P2I0 782 aaKnown RBP9.7□□□□□ -0.86
CPSF1-203ENST00000527916 ATG4BQ9Y4P1 393 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 ASB4Q9Y574 426 aa9.7□□□□□ -0.86
CPSF1-203ENST00000527916 SONP18583 2426 aaKnown RBP9.7□□□□□ -0.86
CPSF1-203ENST00000527916 A0A0A6YYD5 115 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 LRRC14BA6NHZ5 514 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 OR7A17O14581 309 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 DYRK3O43781 588 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 FGF17O60258 216 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 SMIM24O75264 130 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 SH3BGRLO75368 114 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 OR6B1O95007 311 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 SEMA3DO95025 777 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 ETHE1O95571 254 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 GPR75O95800 540 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 IGKV3-11P04433 115 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 C8BP07358 591 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 SNRPAP09012 282 aaKnown RBP9.69□□□□□ -0.86
CPSF1-203ENST00000527916 FAM58BPP0C7Q3 252 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 CNR1P21554 472 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 BMP5P22003 454 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 NR0B1P51843 470 aaKnown RBP9.69□□□□□ -0.86
CPSF1-203ENST00000527916 DDX39BQ13838 428 aaKnown RBP9.69□□□□□ -0.86
CPSF1-203ENST00000527916 SLC10A1Q14973 349 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 FBXL19-AS1Q494R0 122 aa9.69□□□□□ -0.86
CPSF1-203ENST00000527916 GGTA1PQ4G0N0 100 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms