RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 IFNA16P05015 189 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 ITGB2P05107 769 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 SERPINA7P05543 415 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 IDO1P14902 403 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 SSTR4P31391 388 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 SOX11P35716 441 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 CCL11P51671 97 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 SLC37A1P57057 533 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 MRPS35P82673 323 aaKnown RBP10.02□□□□□ -0.81
NEDD8-205ENST00000527046 AIMP2Q13155 320 aaKnown RBP10.02□□□□□ -0.81
NEDD8-205ENST00000527046 ZNF267Q14586 743 aaPredicted RBP10.02□□□□□ -0.81
NEDD8-205ENST00000527046 MLC1Q15049 377 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 GSTA3Q16772 222 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 SPANXN4Q5MJ08 99 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 EXOSC6Q5RKV6 272 aaKnown RBP10.02□□□□□ -0.81
NEDD8-205ENST00000527046 METTL21CQ5VZV1 264 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 B3GNTL1Q67FW5 361 aaPredicted RBP10.02□□□□□ -0.81
NEDD8-205ENST00000527046 C16orf47Q6ZP98 133 aaPredicted RBP10.02□□□□□ -0.81
NEDD8-205ENST00000527046 ACAD11Q709F0 780 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 GPR155Q7Z3F1 870 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 CPSF7Q8N684 471 aaKnown RBP10.02□□□□□ -0.81
NEDD8-205ENST00000527046 MORN4Q8NDC4 146 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 FDCSPQ8NFU4 85 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 OR7G2Q8NG99 324 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 OR8J2Q8NGG1 315 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 OR1N1Q8NGS0 311 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 OR9A2Q8NGT5 310 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 SLC2A12Q8TD20 617 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 KAT2AQ92830 837 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 RIT1Q92963 219 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 NCLNQ969V3 563 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 PPCDCQ96CD2 204 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 ELP4Q96EB1 424 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 RBM18Q96H35 190 aaKnown RBP10.02□□□□□ -0.81
NEDD8-205ENST00000527046 FER1L6-AS2Q96M78 137 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 DGAT2Q96PD7 388 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 ELAC2Q9BQ52 826 aaKnown RBP10.02□□□□□ -0.81
NEDD8-205ENST00000527046 DPY30Q9C005 99 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 RABEP2Q9H5N1 569 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 ATP13A2Q9NQ11 1180 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 SERHLQ9NQF3 203 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 ZIM2Q9NZV7 527 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 SH3BP4Q9P0V3 963 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 NTMQ9P121 344 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 C19orf25Q9UFG5 118 aaPredicted RBP10.02□□□□□ -0.81
NEDD8-205ENST00000527046 PSME2Q9UL46 239 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 DTX4Q9Y2E6 619 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 PKD1L2Q7Z442 2459 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 TNRC6AQ8NDV7 1962 aaKnown RBP10.02□□□□□ -0.81
NEDD8-205ENST00000527046 CPAMD8Q8IZJ3 1885 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 UPK1AO00322 258 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 PLOD2O00469 737 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 PLOD3O60568 738 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 SLC22A3O75751 556 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 COX7A2P14406 83 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 PCSK2P16519 638 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 HOXB9P17482 250 aaPredicted RBP10.01□□□□□ -0.81
NEDD8-205ENST00000527046 PTPN6P29350 595 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 MAP3K8P41279 467 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 EMDP50402 254 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 CDK9P50750 372 aaKnown RBP10.01□□□□□ -0.81
NEDD8-205ENST00000527046 ATP4BP51164 291 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 ARFIP2P53365 341 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 EXOSC7Q15024 291 aaKnown RBP10.01□□□□□ -0.81
NEDD8-205ENST00000527046 TLR1Q15399 786 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 BTBD16Q32M84 506 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 CPTPQ5TA50 214 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 BORAQ6PGQ7 559 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 IGFL2Q6UWQ7 119 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 R3HCC1LQ7Z5L2 792 aaKnown RBP10.01□□□□□ -0.81
NEDD8-205ENST00000527046 C9orf40Q8IXQ3 194 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 CLECL1Q8IZS7 167 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 LRRC25Q8N386 305 aaPredicted RBP10.01□□□□□ -0.81
NEDD8-205ENST00000527046 GALNT16Q8N428 558 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 ZNF441Q8N8Z8 693 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 OR14A16Q8NHC5 309 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 BRIX1Q8TDN6 353 aaKnown RBP10.01□□□□□ -0.81
NEDD8-205ENST00000527046 APOBEC4Q8WW27 367 aaKnown RBP10.01□□□□□ -0.81
NEDD8-205ENST00000527046 HOXB13Q92826 284 aaPredicted RBP10.01□□□□□ -0.81
NEDD8-205ENST00000527046 ADIPOR1Q96A54 375 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 GIMAP5Q96F15 307 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 FBXL20Q96IG2 436 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 THOC3Q96J01 351 aaKnown RBP10.01□□□□□ -0.81
NEDD8-205ENST00000527046 DUSP26Q9BV47 211 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 BHLHE41Q9C0J9 482 aaPredicted RBP10.01□□□□□ -0.81
NEDD8-205ENST00000527046 OR8D2Q9GZM6 311 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 LIN28AQ9H9Z2 209 aaKnown RBP10.01□□□□□ -0.81
NEDD8-205ENST00000527046 MIEF1Q9NQG6 463 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 SAR1AQ9NR31 198 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 SLC6A13Q9NSD5 602 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 ACSS1Q9NUB1 689 aaPredicted RBP10.01□□□□□ -0.81
NEDD8-205ENST00000527046 ERVK-19Q9WJR5 959 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 CLCA3PQ9Y6N3 262 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 ZNF780BQ9Y6R6 833 aa10.01□□□□□ -0.81
NEDD8-205ENST00000527046 A0A1W2PRB8 838 aa10□□□□□ -0.81
NEDD8-205ENST00000527046 A6NL46 340 aa10□□□□□ -0.81
NEDD8-205ENST00000527046 NADKO95544 446 aaPredicted RBP10□□□□□ -0.81
NEDD8-205ENST00000527046 C6orf47O95873 294 aa10□□□□□ -0.81
NEDD8-205ENST00000527046 TROVE2P10155 538 aaKnown RBP eCLIP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms