RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 AKAP9Q99996 3911 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 C1orf226A1L170 272 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 SAGE2PA6NJ88 616 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 KLF11O14901 512 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 FGF17O60258 216 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 LDB3O75112 727 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 SEC22BO75396 215 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 IFNA16P05015 189 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 ANXA4P09525 319 aaPredicted RBP9.44□□□□□ -0.9
VPS28-204ENST00000526054 COX7A2P14406 83 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 ELAVL4P26378 380 aaKnown RBP9.44□□□□□ -0.9
VPS28-204ENST00000526054 MAPK1P28482 360 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 GRNP28799 593 aaKnown RBP9.44□□□□□ -0.9
VPS28-204ENST00000526054 RPL38P63173 70 aaKnown RBP9.44□□□□□ -0.9
VPS28-204ENST00000526054 RAE1P78406 368 aaKnown RBP9.44□□□□□ -0.9
VPS28-204ENST00000526054 PLIN5Q00G26 463 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 FOLH1Q04609 750 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 TERF2Q15554 542 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 ELAVL1Q15717 326 aaKnown RBP9.44□□□□□ -0.9
VPS28-204ENST00000526054 PDCD2Q16342 344 aaPredicted RBP9.44□□□□□ -0.9
VPS28-204ENST00000526054 UGT3A2Q3SY77 523 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 ATP6AP1LQ52LC2 224 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 XKR7Q5GH72 579 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 ACER2Q5QJU3 275 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 FCRLBQ6BAA4 426 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 RPTNQ6XPR3 784 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 BNC2Q6ZN30 1099 aaPredicted RBP9.44□□□□□ -0.9
VPS28-204ENST00000526054 MRGPRGQ86SM5 289 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 TMEM132CQ8N3T6 1108 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 ZNF808Q8N4W9 903 aaPredicted RBP9.44□□□□□ -0.9
VPS28-204ENST00000526054 OR2T11Q8NH01 316 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 LRRC8CQ8TDW0 803 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 C11orf24Q96F05 449 aaPredicted RBP9.44□□□□□ -0.9
VPS28-204ENST00000526054 MAGED4Q96JG8 741 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 ZNF354BQ96LW1 612 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 DGAT2Q96PD7 388 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 ALOXE3Q9BYJ1 711 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 C20orf27Q9GZN8 174 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 ZNF395Q9H8N7 513 aaPredicted RBP9.44□□□□□ -0.9
VPS28-204ENST00000526054 KCNK13Q9HB14 408 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 PNO1Q9NRX1 252 aaKnown RBP9.44□□□□□ -0.9
VPS28-204ENST00000526054 PSME2Q9UL46 239 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 WBP11Q9Y2W2 641 aaKnown RBP9.44□□□□□ -0.9
VPS28-204ENST00000526054 CCL27Q9Y4X3 112 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 POLR3HQ9Y535 204 aaPredicted RBP9.44□□□□□ -0.9
VPS28-204ENST00000526054 PCDHA9Q9Y5H5 950 aa9.44□□□□□ -0.9
VPS28-204ENST00000526054 GLOD5A6NK44 160 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 A8MUA0 341 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 SLCO1B7G3V0H7 640 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 TGFBR3LH3BV60 316 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 LSM1O15116 133 aaKnown RBP9.43□□□□□ -0.9
VPS28-204ENST00000526054 DYRK3O43781 588 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 SLC19A2O60779 497 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 SNNO75324 88 aaPredicted RBP9.43□□□□□ -0.9
VPS28-204ENST00000526054 PRKRAO75569 313 aaKnown RBP9.43□□□□□ -0.9
VPS28-204ENST00000526054 GPR75O95800 540 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 IL3P08700 152 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 DRD2P14416 443 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 ALOX15P16050 662 aaPredicted RBP9.43□□□□□ -0.9
VPS28-204ENST00000526054 TNNI3P19429 210 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 PIK3R1P27986 724 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 PTGER4P35408 488 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 STT3AP46977 705 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 ALDH9A1P49189 494 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 SLC26A5P58743 744 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 TAS2R50P59544 299 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 IGLV3-21P80748 117 aaPredicted RBP9.43□□□□□ -0.9
VPS28-204ENST00000526054 OCRLQ01968 901 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 ID2Q02363 134 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 TUBA3CQ13748 450 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 HEPACAMQ14CZ8 416 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 MEP1AQ16819 746 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 GALNTL6Q49A17 601 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 C6orf163Q5TEZ5 329 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 NOXRED1Q6NXP6 359 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 TUBA3EQ6PEY2 450 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 Q6ZSR9 355 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 IKBIPQ70UQ0 350 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 GDF7Q7Z4P5 450 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 CRLF3Q8IUI8 442 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 SLC5A8Q8N695 610 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 MDS2Q8NDY4 140 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 OR4K14Q8NGD5 310 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 OR14A16Q8NHC5 309 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 CDC26Q8NHZ8 85 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 M1APQ8TC57 530 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 C16orf78Q8WTQ4 265 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 ZNF75CPQ92670 426 aaPredicted RBP9.43□□□□□ -0.9
VPS28-204ENST00000526054 DAZLQ92904 295 aaKnown RBP9.43□□□□□ -0.9
VPS28-204ENST00000526054 ANKRD9Q96BM1 317 aaPredicted RBP9.43□□□□□ -0.9
VPS28-204ENST00000526054 TM4SF18Q96CE8 201 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 KLHL29Q96CT2 875 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 TUBGCP3Q96CW5 907 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 PHF12Q96QT6 1004 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 UTP23Q9BRU9 249 aaKnown RBP9.43□□□□□ -0.9
VPS28-204ENST00000526054 MYNNQ9NPC7 610 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 CHST11Q9NPF2 352 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 KLHL1Q9NR64 748 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 GIMAP4Q9NUV9 329 aa9.43□□□□□ -0.9
VPS28-204ENST00000526054 ANKRD10Q9NXR5 420 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms