RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 RASA2Q15283 850 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 LPAL2Q16609 132 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 GXYLT1Q4G148 440 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 PYCR3Q53H96 274 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 ZNF542PQ5EBM4 170 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 CEP85LQ5SZL2 805 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 LCE1AQ5T7P2 110 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 FAM45BPQ6NSW5 357 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 ZNF549Q6P9A3 640 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 KDM7AQ6ZMT4 941 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 MACC1Q6ZN28 852 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 RAPH1Q70E73 1250 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 OTOAQ7RTW8 1153 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 RABEPKQ7Z6M1 372 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 TRIM74Q86UV6 250 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 MOGAT3Q86VF5 341 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 AMZ2Q86W34 360 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 ZC3HC1Q86WB0 502 aaKnown RBP4.28□□□□□ -1.72
USP48-211ENST00000526044 TRAPPC5Q8IUR0 188 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 CFAP206Q8IYR0 622 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 KRT222Q8N1A0 295 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 RIBC1Q8N443 379 aaPredicted RBP4.28□□□□□ -1.72
USP48-211ENST00000526044 TEX9Q8N6V9 391 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 C9orf106Q8NAJ2 232 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 FAM45AQ8TCE6 357 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 DCAKDQ8WVC6 231 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 ASZ1Q8WWH4 475 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 ELMO1Q92556 727 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 LPGAT1Q92604 370 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 INPP5DQ92835 1189 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 ATOH1Q92858 354 aaPredicted RBP4.28□□□□□ -1.72
USP48-211ENST00000526044 KTI12Q96EK9 354 aaPredicted RBP4.28□□□□□ -1.72
USP48-211ENST00000526044 VPS39Q96JC1 886 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 ELMO2Q96JJ3 720 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 BIRC8Q96P09 236 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 PANX3Q96QZ0 392 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 GPATCH1Q9BRR8 931 aaKnown RBP4.28□□□□□ -1.72
USP48-211ENST00000526044 ARRDC1-AS1Q9H2J1 176 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 CENPHQ9H3R5 247 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 ACTR5Q9H9F9 607 aaPredicted RBP4.28□□□□□ -1.72
USP48-211ENST00000526044 ERVMER34-1Q9H9K5 563 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 SYTL2Q9HCH5 934 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 Q9N2J8 555 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 PNRC2Q9NPJ4 139 aaKnown RBP4.28□□□□□ -1.72
USP48-211ENST00000526044 MRPL40Q9NQ50 206 aaKnown RBP4.28□□□□□ -1.72
USP48-211ENST00000526044 SPATS2LQ9NUQ6 558 aaKnown RBP4.28□□□□□ -1.72
USP48-211ENST00000526044 THAP1Q9NVV9 213 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 TAS2R13Q9NYV9 303 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 PSMC3IPQ9P2W1 217 aaPredicted RBP4.28□□□□□ -1.72
USP48-211ENST00000526044 SUFUQ9UMX1 484 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 SLC17A4Q9Y2C5 497 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 DHRS7Q9Y394 339 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 PSAT1Q9Y617 370 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 PRSS21Q9Y6M0 314 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 R4GN57 208 aa4.28□□□□□ -1.72
USP48-211ENST00000526044 RALGAPA1Q6GYQ0 2036 aa4.28□□□□□ -1.73
USP48-211ENST00000526044 FANCMQ8IYD8 2048 aa4.28□□□□□ -1.73
USP48-211ENST00000526044 ADAMTS9Q9P2N4 1935 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 TRIOO75962 3097 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 PIKFYVEQ9Y2I7 2098 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 TRBV5-7A0A0A0MS05 114 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 A0A1B0GVT2 93 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 A0A1W2PPM1 405 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 MGAT4DA6NG13 374 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 TRIM49D1C9J1S8 452 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 MAP2K7O14733 419 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 DFNA5O60443 496 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 NIPSNAP2O75323 286 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 TGDSO95455 350 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 CSF2P04141 144 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 TK1P04183 234 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 CBSLP0DN79 551 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 LYL1P12980 280 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 IDSP22304 550 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 DGKAP23743 735 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 ATP5DP30049 168 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 CCR7P32248 378 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 CBSP35520 551 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 GNPDA1P46926 289 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 PRLHRP49683 370 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 RGS4P49798 205 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 CLNS1AP54105 237 aaKnown RBP4.27□□□□□ -1.73
USP48-211ENST00000526044 CDKN2DP55273 166 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 LINC00205P59089 165 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 RAB10P61026 200 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 HNRNPKP61978 463 aaKnown RBP eCLIP4.27□□□□□ -1.73
USP48-211ENST00000526044 ARHGAP8P85298 464 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 PLOD1Q02809 727 aaPredicted RBP4.27□□□□□ -1.73
USP48-211ENST00000526044 HSPA14Q0VDF9 509 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 ABRQ12979 859 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 FHL1Q13642 323 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 FZD2Q14332 565 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 TMED2Q15363 201 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 ALG11Q2TAA5 492 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 KIF19Q2TAC6 998 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 TTLL9Q3SXZ7 439 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 KRT71Q3SY84 523 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 BCL7AQ4VC05 210 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 RUNDC3AQ59EK9 446 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 CTSL3PQ5NE16 218 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms