RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 TLCD1Q96CP7 247 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 TPPP3Q9BW30 176 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 TESQ9UGI8 421 aaKnown RBP13.12□□□□□ -0.31
LRRK1-202ENST00000525284 TRAV18A0A075B6X5 111 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 A8MT66 165 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 CHRNA1P02708 482 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 MMP8P22894 467 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 SOX3P41225 446 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 IL10RBQ08334 325 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 ARHGAP19Q14CB8 494 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 RAB35Q15286 201 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 HYAL4Q2M3T9 481 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 SLC27A4Q6P1M0 643 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 GOLGA7Q7Z5G4 137 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 TICAM1Q8IUC6 712 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 LGALS12Q96DT0 336 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 SEC14L6B5MCN3 397 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 SCO2O43819 266 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 PIM1P11309 404 aaPredicted RBP13.11□□□□□ -0.31
LRRK1-202ENST00000525284 GDF10P55107 478 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 FNDC8Q8TC99 324 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 FKBP10Q96AY3 582 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 MMABQ96EY8 250 aaPredicted RBP13.11□□□□□ -0.31
LRRK1-202ENST00000525284 GJD4Q96KN9 370 aaPredicted RBP13.11□□□□□ -0.31
LRRK1-202ENST00000525284 CD300LBA8K4G0 201 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 MANBAO00462 879 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 FADS1O60427 444 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 NDUFV2P19404 249 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 FCER1GP30273 86 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 IDO2Q6ZQW0 420 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 VASH1Q7L8A9 365 aaPredicted RBP13.11□□□□□ -0.31
LRRK1-202ENST00000525284 TAC4Q86UU9 113 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 ZNF100Q8IYN0 542 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 FAM58AQ8N1B3 248 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 KREMEN1Q96MU8 473 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 ZFP57Q9NU63 452 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 MAFBQ9Y5Q3 323 aaPredicted RBP13.11□□□□□ -0.31
LRRK1-202ENST00000525284 HEXBP07686 556 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 TPT1P13693 172 aaKnown RBP13.11□□□□□ -0.31
LRRK1-202ENST00000525284 PORP16435 677 aaPredicted RBP13.11□□□□□ -0.31
LRRK1-202ENST00000525284 GDF5P43026 501 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 ACTC1P68032 377 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 ACTA1P68133 377 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 POU4F2Q12837 409 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 ARSIQ5FYB1 569 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 SPANXN4Q5MJ08 99 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 TMEM151BQ8IW70 566 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 SGPP2Q8IWX5 399 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 HNRNPABQ99729 332 aaKnown RBP13.11□□□□□ -0.31
LRRK1-202ENST00000525284 MMP28Q9H239 520 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 KLRG2A4D1S0 409 aaPredicted RBP13.11□□□□□ -0.31
LRRK1-202ENST00000525284 WNT9AO14904 365 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 ARSFP54793 590 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 CYCSP99999 105 aaKnown RBP13.11□□□□□ -0.31
LRRK1-202ENST00000525284 ZNF585AQ6P3V2 769 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 LIX1LQ8IVB5 337 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 CMTM1Q8IZ96 169 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 PLEKHO2Q8TD55 490 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 NKD2Q969F2 451 aaPredicted RBP13.11□□□□□ -0.31
LRRK1-202ENST00000525284 METTL2AQ96IZ6 378 aaKnown RBP13.11□□□□□ -0.31
LRRK1-202ENST00000525284 NPFFR2Q9Y5X5 522 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 CXCL11O14625 94 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 TNFP01375 233 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 SERPINE2P07093 398 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 ADORA3P0DMS8 318 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 GALEQ14376 348 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 AGAP7PQ5VUJ5 663 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 AGAP6Q5VW22 663 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 BAGE3Q86Y29 109 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 BAGE2Q86Y30 109 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 IL17RCQ8NAC3 791 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 AGAP4Q96P64 663 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 FAM173AQ9BQD7 235 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 MFFQ9GZY8 342 aa13.11□□□□□ -0.31
LRRK1-202ENST00000525284 GABRDO14764 452 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 NPC1O15118 1278 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 LILRB3O75022 631 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 STSP08842 583 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 DHPSP49366 369 aaPredicted RBP13.1□□□□□ -0.31
LRRK1-202ENST00000525284 ACTBP60709 375 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 ACTG1P63261 375 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 DPY19L2P1Q6NXN4 242 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 ZNF574Q6ZN55 896 aaPredicted RBP13.1□□□□□ -0.31
LRRK1-202ENST00000525284 TAS1R3Q7RTX0 852 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 PIM3Q86V86 326 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 IGFN1Q86VF2 1251 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 VWA5B2Q8N398 1253 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 NR4A3Q92570 626 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 CCM2Q9BSQ5 444 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 B4GAT1O43505 415 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 RFPL3O75679 317 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 NPPAP01160 153 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 UBE2KP61086 200 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 POU6F2P78424 691 aaPredicted RBP13.1□□□□□ -0.31
LRRK1-202ENST00000525284 RUNX2Q13950 521 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 PCBP1Q15365 356 aaKnown RBP eCLIP13.1□□□□□ -0.31
LRRK1-202ENST00000525284 LRIT3Q3SXY7 679 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 SLC36A3Q495N2 470 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 REEP3Q6NUK4 255 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 CHDHQ8NE62 594 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms