RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 MRGPREQ86SM8 312 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 ANKRD46Q86W74 232 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 ZNF595Q8IYB9 648 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 TMEM132CQ8N3T6 1108 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 ZNF248Q8NDW4 579 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 OR7G2Q8NG99 324 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 OR4K14Q8NGD5 310 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 OR9A2Q8NGT5 310 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 KLHL29Q96CT2 875 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 COQ8BQ96D53 544 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 OTUB1Q96FW1 271 aaPredicted RBP6.05□□□□□ -1.44
CD44-214ENST00000525211 IMMP1LQ96LU5 166 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 RILPQ96NA2 401 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 AMDHD1Q96NU7 426 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 OR1F2PQ96R84 312 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 CCNL2Q96S94 520 aaPredicted RBP6.05□□□□□ -1.44
CD44-214ENST00000525211 DPH2Q9BQC3 489 aaPredicted RBP6.05□□□□□ -1.44
CD44-214ENST00000525211 CENPKQ9BS16 269 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 NUDT9Q9BW91 350 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 TRIM8Q9BZR9 551 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 ROGDIQ9GZN7 287 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 MYLK2Q9H1R3 596 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 CLMPQ9H6B4 373 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 RUBCNLQ9H714 662 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 CLK4Q9HAZ1 481 aaKnown RBP6.05□□□□□ -1.44
CD44-214ENST00000525211 ZNF160Q9HCG1 818 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 NEUROD4Q9HD90 331 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 SERHLQ9NQF3 203 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 SLC35C2Q9NQQ7 365 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 SDR39U1Q9NRG7 319 aaPredicted RBP6.05□□□□□ -1.44
CD44-214ENST00000525211 SIRT3Q9NTG7 399 aaPredicted RBP6.05□□□□□ -1.44
CD44-214ENST00000525211 C14orf105Q9NVL8 296 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 NMRK1Q9NWW6 199 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 P4HTMQ9NXG6 502 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 AHSPQ9NZD4 102 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 MAT2BQ9NZL9 334 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 NOP53Q9NZM5 478 aaKnown RBP6.05□□□□□ -1.44
CD44-214ENST00000525211 SH3BP4Q9P0V3 963 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 SLAMF8Q9P0V8 285 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 KLHL14Q9P2G3 628 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 GMPR2Q9P2T1 348 aaKnown RBP6.05□□□□□ -1.44
CD44-214ENST00000525211 PHF11Q9UIL8 331 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 RALYQ9UKM9 306 aaKnown RBP6.05□□□□□ -1.44
CD44-214ENST00000525211 UTS2RQ9UKP6 389 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 TMED5Q9Y3A6 229 aa6.05□□□□□ -1.44
CD44-214ENST00000525211 A0A087WV48 116 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 C1orf226A1L170 272 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 ARGFXA6NJG6 315 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 PSMD12O00232 456 aaPredicted RBP6.04□□□□□ -1.44
CD44-214ENST00000525211 FCHO1O14526 889 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 TBX19O60806 448 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 VPS4BO75351 444 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 MYO1DO94832 1006 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 C6orf47O95873 294 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 CBX7O95931 251 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 GSNP06396 782 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 TROVE2P10155 538 aaKnown RBP eCLIP6.04□□□□□ -1.44
CD44-214ENST00000525211 ITGAMP11215 1152 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 PRPS2P11908 318 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 COX7A2P14406 83 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 DRD2P14416 443 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 ACPPP15309 386 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 HOXB9P17482 250 aaPredicted RBP6.04□□□□□ -1.44
CD44-214ENST00000525211 PIK3R1P27986 724 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 PTPN6P29350 595 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 BUD31P41223 144 aaPredicted RBP6.04□□□□□ -1.44
CD44-214ENST00000525211 FRKP42685 505 aaPredicted RBP6.04□□□□□ -1.44
CD44-214ENST00000525211 STT3AP46977 705 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 MRPL19P49406 292 aaKnown RBP6.04□□□□□ -1.44
CD44-214ENST00000525211 PGDP52209 483 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 CASP9P55211 416 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 HSD17B7P56937 341 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 C21orf58P58505 322 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 SLC26A5P58743 744 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 RPS15P62841 145 aaKnown RBP6.04□□□□□ -1.44
CD44-214ENST00000525211 TAGLNQ01995 201 aaKnown RBP6.04□□□□□ -1.44
CD44-214ENST00000525211 CDC20Q12834 499 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 KLF10Q13118 480 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 GAB1Q13480 694 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 ZNF267Q14586 743 aaPredicted RBP6.04□□□□□ -1.44
CD44-214ENST00000525211 SSPNQ14714 243 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 CEBPEQ15744 281 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 SPRED3Q2MJR0 410 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 SMU1Q2TAY7 513 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 PRICKLE4Q2TBC4 344 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 DEFB109BQ30KR1 87 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 FAM174BQ3ZCQ3 159 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 VPS26BQ4G0F5 336 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 AGKQ53H12 422 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 ZNF628Q5EBL2 1059 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 COLEC12Q5KU26 742 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 B3GNTL1Q67FW5 361 aaPredicted RBP6.04□□□□□ -1.44
CD44-214ENST00000525211 OR52E8Q6IFG1 317 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 SLC2A7Q6PXP3 512 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 ACAD11Q709F0 780 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 OLIG3Q7RTU3 272 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 CAMKMTQ7Z624 323 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 BTLAQ7Z6A9 289 aa6.04□□□□□ -1.44
CD44-214ENST00000525211 MTDHQ86UE4 582 aaKnown RBP6.04□□□□□ -1.44
CD44-214ENST00000525211 MSRB3Q8IXL7 192 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms