RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 RTL4Q6ZR62 310 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 TICAM1Q8IUC6 712 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 MMP21Q8N119 569 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 CYP4Z2PQ8N1L4 340 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 LIX1Q8N485 282 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 SLC15A4Q8N697 577 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 ARFGAP2Q8N6H7 521 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 NATD1Q8N6N6 113 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 BCORP1Q8N888 145 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZNF781Q8N8C0 355 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 OR6Y1Q8NGX8 325 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 OR2T11Q8NH01 316 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 NUBPLQ8TB37 319 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZNF721Q8TF20 911 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 ARL8AQ96BM9 186 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 ERP27Q96DN0 273 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 MTERF3Q96E29 417 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZBED6CLQ96FA7 236 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 PPP1R36Q96LQ0 422 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 TSSK3Q96PN8 268 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 SH3GL2Q99962 352 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 TRIM4Q9C037 500 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 WWTR1Q9GZV5 400 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 TUBB1Q9H4B7 451 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 REEP4Q9H6H4 257 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 CXorf21Q9HAI6 301 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZBTB20Q9HC78 741 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 TNFRSF12AQ9NP84 129 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 KLHL1Q9NR64 748 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 DDX18Q9NVP1 670 aaKnown RBP5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 ANKRD10Q9NXR5 420 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 SH3BP4Q9P0V3 963 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 LRFN1Q9P244 771 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 MYOTQ9UBF9 498 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 PRODH2Q9UF12 536 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZDHHC2Q9UIJ5 367 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 PCDHGA10Q9Y5H3 936 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 CLDN16Q9Y5I7 305 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 COPG1Q9Y678 874 aaKnown RBP5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 FER1L5A0AVI2 2057 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 CELSR3Q9NYQ7 3312 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 PCSK5Q92824 1860 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 C2orf92A0A1B0GVN3 265 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 WASHC1A8K0Z3 465 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 KLRC4-KLRK1H3BQV0 150 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 ACOT7O00154 380 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 TP53I11O14683 189 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 KLF11O14901 512 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 HDAC3O15379 428 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 AKAP10O43572 662 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 ITM2AO43736 263 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 LRATO95237 230 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 IGKV3-11P04433 115 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 P04436 131 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 JUNP05412 331 aaKnown RBP5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 SP1P08047 785 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 KITP10721 976 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 BCKDHAP12694 445 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 PLA2G2AP14555 144 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 LBPP18428 481 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 PRPS1L1P21108 318 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 SSTR4P31391 388 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 TRHRP34981 398 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 CD96P40200 585 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 MANFP55145 182 aaKnown RBP5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 MLLT10P55197 1068 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 SLC37A1P57057 533 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 WDR4P57081 412 aaKnown RBP5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 DCAF7P61962 342 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 MRPS22P82650 360 aaKnown RBP5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 EMX2Q04743 252 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 SRSF11Q05519 484 aaKnown RBP5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 FUT7Q11130 342 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 MAP4K2Q12851 820 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZNF155Q12901 538 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 HSPB3Q12988 150 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 KIAA0040Q15053 153 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 EBPQ15125 230 aaKnown RBP5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 RPS6KA2Q15349 733 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 LTB4RQ15722 352 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 MPEG1Q2M385 716 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 PRICKLE4Q2TBC4 344 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZNF750Q32MQ0 723 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 UGT3A2Q3SY77 523 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 SPDYE7PQ495Y7 208 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 RFTN2Q52LD8 501 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 TTMPQ5BVD1 217 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 C6orf136Q5SQH8 315 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 IL23RQ5VWK5 629 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 FAM219BQ5XKK7 198 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 NXNQ6DKJ4 435 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 FAM71E1Q6IPT2 247 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 SLC25A25Q6KCM7 469 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 RPUSD3Q6P087 351 aaKnown RBP5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 IL20RBQ6UXL0 311 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 GK5Q6ZS86 529 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 Q6ZSR9 355 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 SZRD1Q7Z422 152 aa5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 WDR75Q8IWA0 830 aaKnown RBP5.01□□□□□ -1.61
HMGB1P40-201ENST00000525121 CCDC116Q8IYX3 515 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms