RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 CCR5P51681 352 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 SUOXP51687 545 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 CTSCP53634 463 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 DCDC1P59894 354 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 POLR2LP62875 67 aaKnown RBP2.82□□□□□ -1.96
CSDE1-208ENST00000524652 IRX4P78413 519 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 ARHGAP8P85298 464 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 CDK3Q00526 305 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 CDK16Q00536 496 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 FOXO1Q12778 655 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 PDIA2Q13087 525 aaKnown RBP2.82□□□□□ -1.96
CSDE1-208ENST00000524652 TUBB2AQ13885 445 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 FZD2Q14332 565 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 IL13RA2Q14627 380 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 CRYMQ14894 314 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 E2F5Q15329 346 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 SF3A2Q15428 464 aaKnown RBP2.82□□□□□ -1.96
CSDE1-208ENST00000524652 TAF1AQ15573 450 aaPredicted RBP2.82□□□□□ -1.96
CSDE1-208ENST00000524652 CHRNA6Q15825 494 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 UAP1Q16222 522 aaPredicted RBP2.82□□□□□ -1.96
CSDE1-208ENST00000524652 AP5B1Q2VPB7 878 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 ANKRD20A4Q4UJ75 823 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 ZNF658BQ4V348 819 aaPredicted RBP2.82□□□□□ -1.96
CSDE1-208ENST00000524652 ZNF542PQ5EBM4 170 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 CTSL3PQ5NE16 218 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 CEP85LQ5SZL2 805 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 CFAP58Q5T655 872 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 LYSMD4Q5XG99 296 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 HIST2H2BCQ6DN03 193 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 RAET1GQ6H3X3 334 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 PNCKQ6P2M8 343 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 NEK5Q6P3R8 708 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 FAM151BQ6UXP7 276 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 SLC36A4Q6YBV0 504 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 CENPUQ71F23 418 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 LPCAT2Q7L5N7 544 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 MAATS1Q7Z4T9 603 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 PTAR1Q7Z6K3 402 aaPredicted RBP2.82□□□□□ -1.96
CSDE1-208ENST00000524652 PCGF5Q86SE9 256 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 ADGRG6Q86SQ4 1221 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 LINC00523Q86TU6 105 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 HEATR4Q86WZ0 1026 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 NRROSQ86YC3 692 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 ZNF547Q8IVP9 402 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 ZBED8Q8IZ13 594 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 TRAM1L1Q8N609 369 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 DNAAF3Q8N9W5 541 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 DENND6BQ8NEG7 585 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 MNS1Q8NEH6 495 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 DDHD1Q8NEL9 900 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 ACVR1CQ8NER5 493 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 CCL4L1Q8NHW4 92 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 IFT81Q8WYA0 676 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 OR1E3Q8WZA6 343 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 LRRC45Q96CN5 670 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 AP2M1Q96CW1 435 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 RNF183Q96D59 192 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 KTI12Q96EK9 354 aaPredicted RBP2.82□□□□□ -1.96
CSDE1-208ENST00000524652 CFAP36Q96G28 342 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 PDXPQ96GD0 296 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 CDKN2AIPNLQ96HQ2 116 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 SERAC1Q96JX3 654 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 C9orf72Q96LT7 481 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 LRFN5Q96NI6 719 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 RUNDC3BQ96NL0 473 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 VPS35Q96QK1 796 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 NRTNQ99748 197 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 EBNA1BP2Q99848 306 aaKnown RBP2.82□□□□□ -1.96
CSDE1-208ENST00000524652 FERMT1Q9BQL6 677 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 APOOQ9BUR5 198 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 TUBB2BQ9BVA1 445 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 KIFC1Q9BW19 673 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 TXLNGYQ9BZA5 131 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 GPR63Q9BZJ6 419 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 IL22Q9GZX6 179 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 RAB17Q9H0T7 212 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 MMP28Q9H239 520 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 CDC42EP4Q9H3Q1 356 aaKnown RBP2.82□□□□□ -1.96
CSDE1-208ENST00000524652 PLEKHA2Q9HB19 425 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 MRM3Q9HC36 420 aaKnown RBP2.82□□□□□ -1.96
CSDE1-208ENST00000524652 FGF22Q9HCT0 170 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 SAYSD1Q9NPB0 183 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 G6PC2Q9NQR9 355 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 NINJ2Q9NZG7 142 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 PKD2L2Q9NZM6 624 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 ATXN10Q9UBB4 475 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 NFKBIL1Q9UBC1 381 aaPredicted RBP2.82□□□□□ -1.96
CSDE1-208ENST00000524652 GALPQ9UBC7 116 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 SLC23A2Q9UGH3 650 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 ANAPC5Q9UJX4 755 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 TMEM98Q9Y2Y6 226 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 UTP11Q9Y3A2 253 aaKnown RBP2.82□□□□□ -1.96
CSDE1-208ENST00000524652 ADAM18Q9Y3Q7 739 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 PSAT1Q9Y617 370 aa2.82□□□□□ -1.96
CSDE1-208ENST00000524652 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.82□□□□□ -1.96
CSDE1-208ENST00000524652 SCN3AQ9NY46 2000 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 ABCA2Q9BZC7 2435 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 IGSF10Q6WRI0 2623 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 NF1P21359 2839 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 IGLV3-16A0A075B6K0 115 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms