RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 SLC13A3Q8WWT9 602 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 MRPL53Q96EL3 112 aaKnown RBP3.23□□□□□ -1.89
SKP1-212ENST00000523966 RBM18Q96H35 190 aaKnown RBP3.23□□□□□ -1.89
SKP1-212ENST00000523966 ZNF597Q96LX8 424 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 NOTCH4Q99466 2003 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 DCTN5Q9BTE1 182 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 OCR1Q9BZK8 76 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 SETD5Q9C0A6 1442 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 XPO4Q9C0E2 1151 aaKnown RBP3.23□□□□□ -1.89
SKP1-212ENST00000523966 DCTPP1Q9H773 170 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 NT5DC2Q9H857 520 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 HEXA-AS1Q9H8Q6 139 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 THAP10Q9P2Z0 257 aaPredicted RBP3.23□□□□□ -1.89
SKP1-212ENST00000523966 DIMT1Q9UNQ2 313 aaKnown RBP3.23□□□□□ -1.89
SKP1-212ENST00000523966 RPH3AQ9Y2J0 694 aaPredicted RBP3.23□□□□□ -1.89
SKP1-212ENST00000523966 ARHGEF11O15085 1522 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 CDK13Q14004 1512 aaKnown RBP3.23□□□□□ -1.89
SKP1-212ENST00000523966 GPRASP1Q5JY77 1395 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 AFF2P51816 1311 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 IGHV3OR16-10A0A075B7F0 116 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 SH3PXD2BA1X283 911 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 CFAP73A6NFT4 308 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 SRRM4A7MD48 611 aaKnown RBP3.22□□□□□ -1.89
SKP1-212ENST00000523966 SEC22BO75396 215 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 PGK2P07205 417 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 HSD17B1P14061 328 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 GNSP15586 552 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 SLC1A4P43007 532 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 TNFRSF4P43489 277 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 ZNF131P52739 623 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 PAX8Q06710 450 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 ENPP2Q13822 863 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 PDK1Q15118 436 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 FCN2Q15485 313 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 LIPJQ5W064 366 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 PLBD1Q6P4A8 553 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 CNSTQ6PJW8 725 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 PAQR6Q6TCH4 344 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 TMUB2Q71RG4 321 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 ADAMTSL2Q86TH1 951 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 ZNF781Q8N8C0 355 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 COLGALT1Q8NBJ5 622 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 RASL10AQ92737 203 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 C11orf52Q96A22 123 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 COG3Q96JB2 828 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 TAAR6Q96RI8 345 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 COQ7Q99807 217 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 GFRA4Q9GZZ7 299 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 CARD9Q9H257 536 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 SLC25A19Q9HC21 320 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 CTSZQ9UBR2 303 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 SEC14L4Q9UDX3 406 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 CPQQ9Y646 472 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 ABCC2Q92887 1545 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 ROCK1Q13464 1354 aa3.22□□□□□ -1.89
SKP1-212ENST00000523966 TCOF1Q13428 1488 aaKnown RBP3.22□□□□□ -1.89
SKP1-212ENST00000523966 HFM1A2PYH4 1435 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 AKNAQ7Z591 1439 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 KDM5BQ9UGL1 1544 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 GPATCH8Q9UKJ3 1502 aaKnown RBP3.21□□□□□ -1.9
SKP1-212ENST00000523966 KRT87PA6NCN2 255 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 RNF212BA8MTL3 300 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 K7ERI5 159 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 SH2D1BO14796 132 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 TSPAN2O60636 221 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 CXCL14O95715 111 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 MT-ATP6P00846 226 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 ALPPP05187 535 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 FCER2P06734 321 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 PROS1P07225 676 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 ALPPL2P10696 532 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 KRT5P13647 590 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 GAP43P17677 238 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 ARF4P18085 180 aaPredicted RBP3.21□□□□□ -1.9
SKP1-212ENST00000523966 TMOD1P28289 359 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 SFNP31947 248 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 MATKP42679 507 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 MTIF2P46199 727 aaKnown RBP3.21□□□□□ -1.9
SKP1-212ENST00000523966 ATP4BP51164 291 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 ACY1Q03154 408 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 CNPY1Q3B7I2 92 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 HERC4Q5GLZ8 1057 aaPredicted RBP3.21□□□□□ -1.9
SKP1-212ENST00000523966 TOR1AIP1Q5JTV8 583 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 STEAP1BQ6NZ63 245 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 OLFM4Q6UX06 510 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 MFSD7Q6UXD7 560 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 NUFIP2Q7Z417 695 aaKnown RBP3.21□□□□□ -1.9
SKP1-212ENST00000523966 BNIPLQ7Z465 357 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 CARM1Q86X55 608 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 WDR49Q8IV35 697 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 ABHD12Q8N2K0 398 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 KDM8Q8N371 416 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 LRRC17Q8N6Y2 441 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 C4orf32Q8N8J7 132 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 MLKLQ8NB16 471 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 ANKRD20A12PQ8NF67 263 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 OR1K1Q8NGR3 316 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 OR2L2Q8NH16 312 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 NABP1Q96AH0 204 aa3.21□□□□□ -1.9
SKP1-212ENST00000523966 TMEM237Q96Q45 408 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms