RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 IGLV3-21P80748 117 aaPredicted RBP12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 FAPQ12884 760 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 SQLEQ14534 574 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 ADPRMQ3LIE5 342 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 ZNF470Q6ECI4 717 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 ANGPTL8Q6UXH0 198 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 P4HA3Q7Z4N8 544 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 DENND6AQ8IWF6 608 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 PALM2Q8IXS6 379 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 TAGAPQ8N103 731 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 DEPDC4Q8N2C3 294 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 OR1J4Q8NGS1 313 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 PPWD1Q96BP3 646 aaKnown RBP12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 LCORQ96JN0 433 aaPredicted RBP12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 HIST1H2AHQ96KK5 128 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 HIST1H2AJQ99878 128 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 H2AFJQ9BTM1 129 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 OR2B2Q9GZK3 357 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 ARL15Q9NXU5 204 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 CTAGE9A4FU28 777 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 SLC35F4A4IF30 521 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 ELOA3DA6NLF2 546 aaPredicted RBP12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 CAPN14A8MX76 684 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 EMC8O43402 210 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 FGF17O60258 216 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 PTMAP06454 111 aaKnown RBP12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 ZNF708P17019 499 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 GPS1Q13098 491 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 OASLQ15646 514 aaKnown RBP12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 ELOA3BQ3SY89 546 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 KBTBD12Q3ZCT8 623 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 CASC4Q6P4E1 433 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 TRIM40Q6P9F5 258 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 ABHD17CQ6PCB6 329 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 WFDC8Q8IUA0 241 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 RFLNBQ8N5W9 214 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 ELOA3Q8NG57 546 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 DOK4Q8TEW6 326 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 ATG4AQ8WYN0 398 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 CCT6BQ92526 530 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 FBXL8Q96CD0 374 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 DGAT2Q96PD7 388 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 MAPKAP1Q9BPZ7 522 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 ABHD10Q9NUJ1 306 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 PTBP2Q9UKA9 531 aaKnown RBP12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 SOX13Q9UN79 622 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 DYRK1BQ9Y463 629 aa12.5□□□□□ -0.41
NKX3-1-202ENST00000523261 IQANK1A0A1B0GTG1 560 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 A0A1W2PP18 115 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 SLC22A20A6NK97 555 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 TCF21O43680 179 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 DYRK3O43781 588 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 ITGA2P17301 1181 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 MAGEA1P43355 309 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 RGS4P49798 205 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 AP1S2P56377 157 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 SLC37A1P57057 533 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 HERVK_113P63132 956 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 ERVK-8P63133 956 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 TIAL1Q01085 375 aaKnown RBP eCLIP12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 PGGHGQ32M88 737 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 RNF111Q6ZNA4 994 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 OR4N5Q8IXE1 308 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 PPM1NQ8N819 430 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 OR14L1PQ8NHC6 308 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 NEUROG1Q92886 237 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 ERVK-6Q9BXR3 956 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 REXO4Q9GZR2 422 aaKnown RBP12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 CHODLQ9H9P2 273 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 COPS7BQ9H9Q2 264 aaPredicted RBP12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 LYRM4Q9HD34 91 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 SERHLQ9NQF3 203 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 PRDM7Q9NQW5 492 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 IFNKQ9P0W0 207 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 TRMT6Q9UJA5 497 aaKnown RBP12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 ERVK-19Q9WJR5 959 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 RNF115Q9Y4L5 304 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 COMMD10Q9Y6G5 202 aa12.49□□□□□ -0.41
NKX3-1-202ENST00000523261 CDC7O00311 574 aa12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 CLEC3AO75596 197 aa12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 CD8AP01732 235 aa12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 CLPSP04118 112 aa12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 DPP4P27487 766 aa12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 PCDH1Q08174 1060 aa12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 TMIGD1Q6UXZ0 262 aa12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 STAC2Q6ZMT1 411 aa12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 VN1R5Q7Z5H4 357 aa12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 THOC6Q86W42 341 aaKnown RBP12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 IFNEQ86WN2 208 aa12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 MYO1HQ8N1T3 1032 aa12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 C7orf57Q8NEG2 295 aa12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 TTLQ8NG68 377 aa12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 RDH11Q8TC12 318 aa12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 C11orf24Q96F05 449 aaPredicted RBP12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 RBM18Q96H35 190 aaKnown RBP12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 TRAF4Q9BUZ4 470 aaPredicted RBP12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 SNX15Q9NRS6 342 aa12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 KCNS2Q9ULS6 477 aa12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 PROCRQ9UNN8 238 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms