RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 C9orf40Q8IXQ3 194 aa13.96□□□□□ -0.18
PCM1-218ENST00000523055 ST13P4Q8IZP2 240 aaPredicted RBP13.96□□□□□ -0.18
PCM1-218ENST00000523055 CYP4Z2PQ8N1L4 340 aa13.96□□□□□ -0.18
PCM1-218ENST00000523055 TMEM156Q8N614 296 aa13.96□□□□□ -0.18
PCM1-218ENST00000523055 CPSF7Q8N684 471 aaKnown RBP13.96□□□□□ -0.18
PCM1-218ENST00000523055 CHTF18Q8WVB6 975 aa13.96□□□□□ -0.18
PCM1-218ENST00000523055 CAVIN3Q969G5 261 aa13.96□□□□□ -0.18
PCM1-218ENST00000523055 ZBTB9Q96C00 473 aa13.96□□□□□ -0.18
PCM1-218ENST00000523055 SENP5Q96HI0 755 aaPredicted RBP13.96□□□□□ -0.18
PCM1-218ENST00000523055 RASL10BQ96S79 203 aa13.96□□□□□ -0.18
PCM1-218ENST00000523055 CNPPD1Q9BV87 410 aa13.96□□□□□ -0.18
PCM1-218ENST00000523055 PARD6BQ9BYG5 372 aa13.96□□□□□ -0.18
PCM1-218ENST00000523055 SHCBP1LQ9BZQ2 653 aa13.96□□□□□ -0.18
PCM1-218ENST00000523055 MYOTQ9UBF9 498 aa13.96□□□□□ -0.18
PCM1-218ENST00000523055 ERVK-19Q9WJR5 959 aa13.96□□□□□ -0.18
PCM1-218ENST00000523055 PCDHGB6Q9Y5F9 930 aa13.96□□□□□ -0.18
PCM1-218ENST00000523055 INTS1Q8N201 2190 aaKnown RBP13.95□□□□□ -0.18
PCM1-218ENST00000523055 SYNDIG1LA6NDD5 238 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 ZNHIT1O43257 154 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 SPAG7O75391 227 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 OR6B1O95007 311 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 ESRRBO95718 433 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 KRT6AP02538 564 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 CLPSP04118 112 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 KRT6BP04259 564 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 COX7A2P14406 83 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 CPA3P15088 417 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 CREB1P16220 341 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 RFC3P40938 356 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 KRT6CP48668 564 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 SSR4P51571 173 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 SMSP52788 366 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 PKNOX1P55347 436 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 GPR85P60893 370 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 IFFO1Q0D2I5 559 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 RNFT1Q5M7Z0 435 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 Q6ZPB1 254 aaPredicted RBP13.95□□□□□ -0.18
PCM1-218ENST00000523055 FRMD7Q6ZUT3 714 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 TMEM178AQ8NBL3 297 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 DNAJB8Q8NHS0 232 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 APIPQ96GX9 242 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 RBM18Q96H35 190 aaKnown RBP13.95□□□□□ -0.18
PCM1-218ENST00000523055 FBXL20Q96IG2 436 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 APOPT1Q96IL0 206 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 WDR41Q9HAD4 459 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 OXSMQ9NWU1 459 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 AHSPQ9NZD4 102 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 VPS29Q9UBQ0 182 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 COPS7AQ9UBW8 275 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 LGALS13Q9UHV8 139 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 ADAM29Q9UKF5 820 aa13.95□□□□□ -0.18
PCM1-218ENST00000523055 YARS2Q9Y2Z4 477 aaKnown RBP13.95□□□□□ -0.18
PCM1-218ENST00000523055 ASPDHA6ND91 283 aa13.94□□□□□ -0.18
PCM1-218ENST00000523055 OR10H2O60403 315 aa13.94□□□□□ -0.18
PCM1-218ENST00000523055 ULK1O75385 1050 aa13.94□□□□□ -0.18
PCM1-218ENST00000523055 CRYABP02511 175 aaKnown RBP13.94□□□□□ -0.18
PCM1-218ENST00000523055 ENO1P06733 434 aaKnown RBP13.94□□□□□ -0.18
PCM1-218ENST00000523055 CT62P0C5K7 136 aa13.94□□□□□ -0.18
PCM1-218ENST00000523055 SERPINB3P29508 390 aa13.94□□□□□ -0.18
PCM1-218ENST00000523055 DEKP35659 375 aaKnown RBP13.94□□□□□ -0.18
PCM1-218ENST00000523055 RAE1P78406 368 aaKnown RBP13.94□□□□□ -0.18
PCM1-218ENST00000523055 DUSP2Q05923 314 aa13.94□□□□□ -0.18
PCM1-218ENST00000523055 CSTF3Q12996 717 aaKnown RBP13.94□□□□□ -0.18
PCM1-218ENST00000523055 ZNF267Q14586 743 aaPredicted RBP13.94□□□□□ -0.18
PCM1-218ENST00000523055 IL20RBQ6UXL0 311 aa13.94□□□□□ -0.18
PCM1-218ENST00000523055 PAGE2Q7Z2X7 111 aa13.94□□□□□ -0.18
PCM1-218ENST00000523055 C10orf107Q8IVU9 208 aa13.94□□□□□ -0.18
PCM1-218ENST00000523055 CNPY4Q8N129 248 aa13.94□□□□□ -0.18
PCM1-218ENST00000523055 HORMAD2Q8N7B1 307 aa13.94□□□□□ -0.18
PCM1-218ENST00000523055 BANPQ8N9N5 519 aa13.94□□□□□ -0.18
PCM1-218ENST00000523055 TM4SF18Q96CE8 201 aa13.94□□□□□ -0.18
PCM1-218ENST00000523055 CCDC126Q96EE4 140 aa13.94□□□□□ -0.18
PCM1-218ENST00000523055 SLC17A7Q9P2U7 560 aa13.94□□□□□ -0.18
PCM1-218ENST00000523055 MEMO1Q9Y316 297 aa13.94□□□□□ -0.18
PCM1-218ENST00000523055 FLNAP21333 2647 aaKnown RBP13.94□□□□□ -0.18
PCM1-218ENST00000523055 A0A0G2JMM0 328 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 A0A1W2PPB8 328 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 A0A1W2PRS3 328 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 FAM221AA4D161 298 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 KIR3DP1A8MWS1 328 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 HSD3B1P14060 373 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 IGFBP2P18065 325 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 HSD3B2P26439 372 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 PIK3R1P27986 724 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 SSTR4P31391 388 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 MEOX1P50221 254 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 DNAJB13P59910 316 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 BTKQ06187 659 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 ASPHQ12797 758 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 SPRED3Q2MJR0 410 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 LIPMQ5VYY2 423 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 SULF2Q8IWU5 870 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 RIBC1Q8N443 379 aaPredicted RBP13.93□□□□□ -0.18
PCM1-218ENST00000523055 RDH11Q8TC12 318 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 ASB15Q8WXK1 588 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 RIT1Q92963 219 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 TMEM125Q96AQ2 219 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 FAM111AQ96PZ2 611 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 GAL3ST4Q96RP7 486 aa13.93□□□□□ -0.18
PCM1-218ENST00000523055 MECRQ9BV79 373 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms