RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 GPC6Q9Y625 555 aaPredicted RBP10.17□□□□□ -0.78
RAB11FIP1-204ENST00000522774 LOC100506127A0A0U1RQW1 187 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 EPPINO95925 133 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 C8orf89P0DMQ9 161 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 NR2F1P10589 423 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 OSMP13725 252 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 DRD2P14416 443 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 TEAD1P28347 426 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 RAB15P59190 212 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 TRA2BP62995 288 aaKnown RBP10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 RPS21P63220 83 aaKnown RBP10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 LSM11P83369 360 aaKnown RBP eCLIP10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 ZNF776Q68DI1 518 aaPredicted RBP10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 C18orf63Q68DL7 685 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 TMEM145Q8NBT3 493 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 SUN3Q8TAQ9 357 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 PPP1R14BQ96C90 147 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 CNRIP1Q96F85 164 aaPredicted RBP10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 BBS4Q96RK4 519 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 SLC17A9Q9BYT1 436 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 DSN1Q9H410 356 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 PRDM7Q9NQW5 492 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 FBXW2Q9UKT8 454 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 A4GNTQ9UNA3 340 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 ASB4Q9Y574 426 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 TMEM247A6NEH6 219 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 EPOPA6NHQ4 379 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 K7EQS6 105 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 TPST2O60704 377 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 RNGTTO60942 597 aaKnown RBP10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 ENTPD6O75354 484 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 CHRM4P08173 479 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 DDX5P17844 614 aaKnown RBP10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 HIST1H1TP22492 207 aaPredicted RBP10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 CERS1P27544 350 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 KIR2DL1P43626 348 aaPredicted RBP10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 GSTM5P46439 218 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 RAB8AP61006 207 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 SLC9A5Q14940 896 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 RPE65Q16518 533 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 PGBD2Q6P3X8 592 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 ABHD17CQ6PCB6 329 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 CCDC116Q8IYX3 515 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 TBC1D19Q8N5T2 526 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 ACOT4Q8N9L9 421 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 OR2L3Q8NG85 312 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 MCFD2Q8NI22 146 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 FUZQ9BT04 418 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 PBX4Q9BYU1 374 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 ANKRA2Q9H9E1 313 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 FGF22Q9HCT0 170 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 LMCD1Q9NZU5 365 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 ENOPH1Q9UHY7 261 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 ACAD8Q9UKU7 415 aa10.16□□□□□ -0.78
RAB11FIP1-204ENST00000522774 TLR4O00206 839 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 DSCR3O14972 297 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 ZW10O43264 779 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 NME6O75414 186 aaPredicted RBP10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 AIFM1O95831 613 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 DBTP11182 482 aaKnown RBP10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 ATP5A1P25705 553 aaKnown RBP10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 NTSP30990 170 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 RGS6P49758 472 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 BCAP31P51572 246 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 LASP1Q14847 261 aaKnown RBP10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 OXA1LQ15070 435 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 TRIM16LQ309B1 348 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 UAP1L1Q3KQV9 507 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 ITPRIPL2Q3MIP1 535 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 TMEM35AQ53FP2 167 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 TOR1AIP1Q5JTV8 583 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 MRM1Q6IN84 353 aaKnown RBP10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 SYCE2Q6PIF2 218 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 DGLUCYQ7Z3D6 616 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 BCDIN3DQ7Z5W3 292 aaKnown RBP10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 FAM46DQ8NEK8 389 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 TTLQ8NG68 377 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 C16orf58Q96GQ5 468 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 CENPOQ9BU64 300 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 APOOQ9BUR5 198 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 CTPS2Q9NRF8 586 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 CLN6Q9NWW5 311 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 EHD3Q9NZN3 535 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 DNAJC27Q9NZQ0 273 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 MGAT4BQ9UQ53 548 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 IFT52Q9Y366 437 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 PCDHGA3Q9Y5H0 932 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 KCNE3Q9Y6H6 103 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 METTL15A6NJ78 407 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 H3BN98 237 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 FAAHO00519 579 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 SLC31A1O15431 190 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 NARSO43776 548 aaKnown RBP10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 SERPINB7O75635 380 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 EML2O95834 649 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 TP53P04637 393 aaPredicted RBP10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 HMGN2P05204 90 aaKnown RBP10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 RPLP0P05388 317 aaKnown RBP10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 UGT2B10P36537 528 aa10.15□□□□□ -0.78
RAB11FIP1-204ENST00000522774 SLC15A1P46059 708 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms