RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 SERPINA9Q86WD7 417 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 CPNE9Q8IYJ1 553 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 DNAJC22Q8N4W6 341 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 ARIH2OSQ8N7S6 290 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 SNX31Q8N9S9 440 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 OR52N2Q8NGI0 321 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 OR5M9Q8NGP3 310 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 LKAAEAR1Q8TD35 194 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 TRPC4APQ8TEL6 797 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 ZNF483Q8TF39 744 aaPredicted RBP6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 NAT14Q8WUY8 206 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 STMN2Q93045 179 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 ZMYND19Q96E35 227 aaPredicted RBP6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 LINGO1Q96FE5 620 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 VPS50Q96JG6 964 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 KCNA7Q96RP8 456 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 CDRT15Q96T59 188 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 TTC1Q99614 292 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 CCL19Q99731 98 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 BEX2Q9BXY8 128 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 ATG10Q9H0Y0 220 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 TUBB1Q9H4B7 451 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 FAM83DQ9H4H8 585 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 MID1IP1Q9NPA3 183 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 NMRK1Q9NWW6 199 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 GIMAP2Q9UG22 337 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 TRMT6Q9UJA5 497 aaKnown RBP6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 C3orf18Q9UK00 162 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 POMPQ9Y244 141 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 DHRS7Q9Y394 339 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 PKP3Q9Y446 797 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 PTGDR2Q9Y5Y4 395 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 COMMD10Q9Y6G5 202 aa6.78□□□□□ -1.32
CTNNA1-227ENST00000521387 TRBV5-4A0A0C4DH59 114 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 C1orf232A0A0U1RR37 186 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 A0A1B0GX78 115 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 ATP6AP2A0A1C7CYW4 349 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 NCF1BA6NI72 391 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 VGLL3A8MV65 326 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 NCF1CA8MVU1 366 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 STX16-NPEPL1H3BU86 382 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 PSMD12O00232 456 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 STX16O14662 325 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 PRMT5O14744 637 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 PIP5K1BO14986 540 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 PFDN6O15212 129 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 CFLARO15519 480 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 GPRIN2O60269 458 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 CDC40O60508 579 aaKnown RBP eCLIP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 ATP6AP2O75787 350 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 SLC25A14O95258 325 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 MATN4O95460 622 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 ESR1P03372 595 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 ALDOCP09972 364 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 ZGLP1P0C6A0 271 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 NCF1P14598 390 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 GPX3P22352 226 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 RPS3P23396 243 aaKnown RBP eCLIP6.77□□□□□ -1.335e-8■■□□□ 11.8
CTNNA1-227ENST00000521387 HMGCLP35914 325 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 RAB28P51157 221 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 ATP4BP51164 291 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 ADARP55265 1226 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 PKNOX1P55347 436 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 IL2P60568 153 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 CEACAM7Q14002 265 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 NFE2L1Q14494 772 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 C18orf21Q32NC0 220 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 PIGGQ5H8A4 983 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 AARS2Q5JTZ9 985 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 TCHHL1Q5QJ38 904 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 KANK2Q63ZY3 851 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 PTRHD1Q6GMV3 140 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 UGT3A1Q6NUS8 523 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 B3GNT6Q6ZMB0 384 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 SEM1Q6ZVN7 128 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 GPSM1Q86YR5 675 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 FUNDC1Q8IVP5 155 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 PGAM4Q8N0Y7 254 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 METTL27Q8N6F8 245 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 C19orf47Q8N9M1 422 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 TMEM178AQ8NBL3 297 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 GPR26Q8NDV2 337 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 STT3BQ8TCJ2 826 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 TWIST2Q8WVJ9 160 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 PYDC1Q8WXC3 89 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 DNAJC9Q8WXX5 260 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 SMPDL3BQ92485 455 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 ESAMQ96AP7 390 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 ZBED6CLQ96FA7 236 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 PDLIM5Q96HC4 596 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 ANKRD27Q96NW4 1050 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 YIPF4Q9BSR8 244 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 C1QTNF3Q9BXJ4 246 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 CHRNA10Q9GZZ6 450 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 ESRP2Q9H6T0 727 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 ASB8Q9H765 288 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 AKTIPQ9H8T0 292 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 WDR41Q9HAD4 459 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 EFCAB1Q9HAE3 211 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms