RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 PTPN6P29350 595 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 DHPSP49366 369 aaPredicted RBP3.5□□□□□ -1.85
SQLE-204ENST00000520493 NLRP11P59045 1033 aaKnown RBP3.5□□□□□ -1.85
SQLE-204ENST00000520493 CSNK2BP67870 215 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 CDKL1Q00532 357 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 GUCY2DQ02846 1103 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 OR1C1Q15619 314 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 PDK4Q16654 411 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 ZNF528Q3MIS6 628 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 GTDC1Q4AE62 458 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 CCDC152Q4G0S7 254 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 FAM106AQ4KMX7 169 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 ZC2HC1BQ5TFG8 222 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 NIPAL3Q6P499 406 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 SH2D5Q6ZV89 423 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 PAQR9Q6ZVX9 377 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 LRRC70Q7Z2Q7 622 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 C5orf24Q7Z6I8 188 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 FAM131BQ86XD5 332 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 APLFQ8IW19 511 aaPredicted RBP3.5□□□□□ -1.85
SQLE-204ENST00000520493 TCEANCQ8N8B7 351 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 EIF1ADQ8N9N8 165 aaKnown RBP3.5□□□□□ -1.85
SQLE-204ENST00000520493 KBTBD8Q8NFY9 601 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 OR52K2Q8NGK3 314 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 OR13C2Q8NGS9 318 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 OR2T3Q8NH03 318 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 TMEM190Q8WZ59 177 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 TAF15Q92804 592 aaKnown RBP eCLIP3.5□□□□□ -1.85
SQLE-204ENST00000520493 MAGED4Q96JG8 741 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 TTC25Q96NG3 672 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 TBCDQ9BTW9 1192 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 FUCA2Q9BTY2 467 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 NDUFAF3Q9BU61 184 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 FUNDC2Q9BWH2 189 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 PUS3Q9BZE2 481 aaKnown RBP3.5□□□□□ -1.85
SQLE-204ENST00000520493 MTIF3Q9H2K0 278 aaKnown RBP3.5□□□□□ -1.85
SQLE-204ENST00000520493 FAM124BQ9H5Z6 455 aaPredicted RBP3.5□□□□□ -1.85
SQLE-204ENST00000520493 MTHFD2LQ9H903 347 aaPredicted RBP3.5□□□□□ -1.85
SQLE-204ENST00000520493 VPS37BQ9H9H4 285 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 ZNF71Q9NQZ8 489 aaPredicted RBP3.5□□□□□ -1.85
SQLE-204ENST00000520493 NMRK1Q9NWW6 199 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 ZNF319Q9P2F9 582 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 ERVK-18Q9QC07 812 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 LHX3Q9UBR4 397 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 MRTO4Q9UKD2 239 aaKnown RBP3.5□□□□□ -1.85
SQLE-204ENST00000520493 PPP2R2CQ9Y2T4 447 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 KIF16BQ96L93 1317 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 STK36Q9NRP7 1315 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 A0A087WW49 117 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 hCG_38984A0A1B0GV85 526 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 YJEFN3A6XGL0 299 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 K7EQM0 130 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 MLNRO43193 412 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 BUB1O43683 1085 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 CDC123O75794 336 aaPredicted RBP3.49□□□□□ -1.85
SQLE-204ENST00000520493 OR4F21O95013 312 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 NDUFA7O95182 113 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 IQCF3P0C7M6 154 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 RPA2P15927 270 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 PAICSP22234 425 aaKnown RBP3.49□□□□□ -1.85
SQLE-204ENST00000520493 FEN1P39748 380 aaKnown RBP3.49□□□□□ -1.85
SQLE-204ENST00000520493 ACADVLP49748 655 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 GNB1P62873 340 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 TATDN3Q17R31 274 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 DCAF4L1Q3SXM0 396 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 LRRC37A5PQ49AS3 106 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 ZNF311Q5JNZ3 666 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 LYPLAL1Q5VWZ2 237 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 RTL6Q6ICC9 239 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 CDC42EP5Q6NZY7 148 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 TMEM64Q6YI46 380 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 C17orf107Q6ZR85 190 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 STXBP4Q6ZWJ1 553 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 GRAMD2AQ8IUY3 354 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 SLC22A15Q8IZD6 547 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 OR56B2PQ8NGI1 322 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 MAPK15Q8TD08 544 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 RNF139Q8WU17 664 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 ZNF607Q96SK3 696 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 KRT12Q99456 494 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 ZBTB18Q99592 522 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 PAPOLGQ9BWT3 736 aaKnown RBP3.49□□□□□ -1.85
SQLE-204ENST00000520493 RBM24Q9BX46 236 aaKnown RBP3.49□□□□□ -1.85
SQLE-204ENST00000520493 HOXD1Q9GZZ0 328 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 FNDC4Q9H6D8 234 aaPredicted RBP3.49□□□□□ -1.85
SQLE-204ENST00000520493 ZNF665Q9H7R5 613 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 S100A14Q9HCY8 104 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 RABL2AQ9UBK7 228 aaPredicted RBP3.49□□□□□ -1.85
SQLE-204ENST00000520493 ATP6V1HQ9UI12 483 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 DIMT1Q9UNQ2 313 aaKnown RBP3.49□□□□□ -1.85
SQLE-204ENST00000520493 PTCH1Q13635 1447 aa3.49□□□□□ -1.85
SQLE-204ENST00000520493 XKRY2A2RUG3 117 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 RNF222A6NCQ9 220 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 A8MUI8 341 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 SURF4O15260 269 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 SDC3O75056 442 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 TRMUO75648 421 aaKnown RBP3.48□□□□□ -1.85
SQLE-204ENST00000520493 KIAA0754O94854 1291 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 CA3P07451 260 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms