RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 ZNF444Q8N0Y2 327 aaPredicted RBP3.67□□□□□ -1.82
CTNNA1-222ENST00000520400 ABHD12Q8N2K0 398 aa3.67□□□□□ -1.82
CTNNA1-222ENST00000520400 NEK11Q8NG66 645 aa3.67□□□□□ -1.82
CTNNA1-222ENST00000520400 SPATA3Q8NHX4 192 aa3.67□□□□□ -1.82
CTNNA1-222ENST00000520400 P3H4Q92791 437 aa3.67□□□□□ -1.82
CTNNA1-222ENST00000520400 SLCO4A1Q96BD0 722 aa3.67□□□□□ -1.82
CTNNA1-222ENST00000520400 GPR137Q96N19 417 aa3.67□□□□□ -1.82
CTNNA1-222ENST00000520400 TMEM237Q96Q45 408 aa3.67□□□□□ -1.82
CTNNA1-222ENST00000520400 TRIM15Q9C019 465 aa3.67□□□□□ -1.82
CTNNA1-222ENST00000520400 KCNK13Q9HB14 408 aa3.67□□□□□ -1.82
CTNNA1-222ENST00000520400 SLC25A19Q9HC21 320 aa3.67□□□□□ -1.82
CTNNA1-222ENST00000520400 KLK13Q9UKR3 277 aa3.67□□□□□ -1.82
CTNNA1-222ENST00000520400 TDRKHQ9Y2W6 561 aaKnown RBP3.67□□□□□ -1.82
CTNNA1-222ENST00000520400 KNSTRNQ9Y448 316 aa3.67□□□□□ -1.82
CTNNA1-222ENST00000520400 RRBP1Q9P2E9 1410 aaKnown RBP3.67□□□□□ -1.82
CTNNA1-222ENST00000520400 UNC13BO14795 1591 aa3.67□□□□□ -1.82
CTNNA1-222ENST00000520400 KIF7Q2M1P5 1343 aa3.67□□□□□ -1.82
CTNNA1-222ENST00000520400 ANKRD30AQ9BXX3 1397 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 KIF15Q9NS87 1388 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 DUOX2Q9NRD8 1548 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 KIF1BO60333 1816 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 A0A0U1RRA0 63 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 MACROD2A1Z1Q3 448 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 A8MXK9 166 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 FBP2O00757 339 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 ADAM12O43184 909 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 ANXA9O76027 345 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 TBX6O95947 436 aaPredicted RBP3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 HCKP08631 526 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 CCDC159P0C7I6 412 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 CAPN2P17655 700 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 PKLRP30613 574 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 ZFP36L2P47974 494 aaKnown RBP3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 CRYBA2P53672 197 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 CASP9P55211 416 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 KCNK10P57789 538 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 SRP54P61011 504 aaKnown RBP3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 ERVK-16P61578 105 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 ELAVL2Q12926 359 aaKnown RBP3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 WDR25Q64LD2 544 aaPredicted RBP3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 TOM1L2Q6ZVM7 507 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 TIPARPQ7Z3E1 657 aaKnown RBP3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 TMEM185AQ8NFB2 350 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 OR4F5Q8NH21 305 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 GANCQ8TET4 914 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 TAF15Q92804 592 aaKnown RBP eCLIP3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 SLC45A3Q96JT2 553 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 ZNF597Q96LX8 424 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 RBM4BQ9BQ04 359 aaKnown RBP3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 FUNDC2Q9BWH2 189 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 SLC26A1Q9H2B4 701 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 TMEM245Q9H330 911 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 DEPPQ9NTK1 212 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 COMMD8Q9NX08 183 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 MRTO4Q9UKD2 239 aaKnown RBP3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 PDE4DIPQ5VU43 2346 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 DEPDC5O75140 1603 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 MROH1Q8NDA8 1641 aa3.66□□□□□ -1.82
CTNNA1-222ENST00000520400 XIRP1Q702N8 1843 aaKnown RBP3.65□□□□□ -1.82
CTNNA1-222ENST00000520400 MROH2AA6NES4 1674 aa3.65□□□□□ -1.82
CTNNA1-222ENST00000520400 E9PCH4 1651 aa3.65□□□□□ -1.82
CTNNA1-222ENST00000520400 ZC3H13Q5T200 1668 aaKnown RBP3.65□□□□□ -1.82
CTNNA1-222ENST00000520400 SPHKAPQ2M3C7 1700 aa3.65□□□□□ -1.82
CTNNA1-222ENST00000520400 DIP2AQ14689 1571 aa3.65□□□□□ -1.82
CTNNA1-222ENST00000520400 REREQ9P2R6 1566 aa3.65□□□□□ -1.82
CTNNA1-222ENST00000520400 TRGV8A0A0C4DH27 118 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 ASB14A6NK59 587 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 RPL37AP8A6NKH3 93 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 SHISA9B4DS77 424 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 TRAFD1O14545 582 aaPredicted RBP3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 FRAT2O75474 233 aaPredicted RBP3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 POP4O95707 220 aaKnown RBP3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 IGHG1P01857 330 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 AREGP15514 252 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 AHCYP23526 432 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 TNFRSF4P43489 277 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 VEGFCP49767 419 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 HNRNPFP52597 415 aaKnown RBP3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 NLRP11P59045 1033 aaKnown RBP3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 KRTAP10-6P60371 365 aaPredicted RBP3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 EXOSC7Q15024 291 aaKnown RBP3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 P2RY14Q15391 338 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 MS4A18Q3C1V0 323 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 LIPJQ5W064 366 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 TATDN1Q6P1N9 297 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 DLEU7Q6UYE1 221 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 Q6ZRG5 221 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 C17orf64Q86WR6 236 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 TBC1D10CQ8IV04 446 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 ZNF491Q8N8L2 437 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 ZNF485Q8NCK3 441 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 OR6F1Q8NGZ6 308 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 ATP6V0A1Q93050 837 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 RAB39BQ96DA2 213 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 SIRPDQ9H106 197 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 UBE2TQ9NPD8 197 aaPredicted RBP3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 GDF3Q9NR23 364 aa3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 KLF2Q9Y5W3 355 aaPredicted RBP3.65□□□□□ -1.83
CTNNA1-222ENST00000520400 STYXL1Q9Y6J8 313 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms