RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 POLR2J2Q9GZM3 115 aaKnown RBP11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 ZNF395Q9H8N7 513 aaPredicted RBP11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 RNF6Q9Y252 685 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 TRBC2A0A5B9 178 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 EIF1AYO14602 144 aaKnown RBP11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 COCHO43405 550 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 HTR1AP08908 422 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 ALDH3B2P48448 385 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 AVPI1Q5T686 147 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 SLC15A3Q8IY34 581 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 SVBPQ8N300 66 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 XYLT2Q9H1B5 865 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 PAK1IP1Q9NWT1 392 aaPredicted RBP11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 C19orf25Q9UFG5 118 aaPredicted RBP11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 SLC7A11Q9UPY5 501 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 NFS1Q9Y697 457 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 DOT1LQ8TEK3 1739 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 F8W036 122 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 H3BMQ9 156 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 H7C1Q1 480 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 H1F0P07305 194 aaKnown RBP11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 CKMT2P17540 419 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 OPRL1P41146 370 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 CASP3P42574 277 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 MAGEA3P43357 314 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 RPS13P62277 151 aaKnown RBP11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 BLOC1S1P78537 153 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 MC2RQ01718 297 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 AMZ1Q400G9 498 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 KIAA0319Q5VV43 1072 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 NOXRED1Q6NXP6 359 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 GRASPQ7Z6J2 395 aaPredicted RBP11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 TRMT10AQ8TBZ6 339 aaKnown RBP11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 COG8Q96MW5 612 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 KCNA7Q96RP8 456 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 RANBP9Q96S59 729 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 NDC1Q9BTX1 674 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 ACTR6Q9GZN1 396 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 TUBB1Q9H4B7 451 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 SIAEQ9HAT2 523 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 CLDND1Q9NY35 253 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 PLAGL1Q9UM63 463 aa11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 CFAP20Q9Y6A4 193 aaKnown RBP11.61□□□□□ -0.55
ERGIC1-208ENST00000520399 A0A1W2PP18 115 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 A8MVJ9 347 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 H0YAE9 185 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 SLC2A5P22732 501 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 CHRNB4P30926 498 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 GSK3BP49841 420 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 GPR68Q15743 365 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 TMEM156Q8N614 296 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 AVL9Q8NBF6 648 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 OR56A1Q8NGH5 318 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 OR9A1PQ8NGU1 263 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 WDR77Q9BQA1 342 aaPredicted RBP11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 SMG9Q9H0W8 520 aaKnown RBP11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 CTPS2Q9NRF8 586 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 TRAPPC13A5PLN9 417 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 A8MXE2 369 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 FAM189A1O60320 539 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 FARS2O95363 451 aaKnown RBP11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 CSF2P04141 144 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 EIF1AXP47813 144 aaKnown RBP11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 TMEM35AQ53FP2 167 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 ZNF283Q8N7M2 679 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 CASTOR1Q8WTX7 329 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 THEM6Q8WUY1 208 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 FBXL12Q9NXK8 326 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 FBXL3Q9UKT7 428 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 RGPD2P0DJD1 1756 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 PAK4O96013 591 aaPredicted RBP11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 GDF5P43026 501 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 FNTBP49356 437 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 TMEM236Q5W0B7 351 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 METTL7AQ9H8H3 244 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 TUBG2Q9NRH3 451 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 HRH3Q9Y5N1 445 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 ZNF705FA8MVS1 300 aaPredicted RBP11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 SOCS5O75159 536 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 RCBTB2O95199 551 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 OPN1SWP03999 348 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 ZNF705DP0CH99 300 aaPredicted RBP11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 ZNF705BP0CI00 300 aaPredicted RBP11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 FGF3P11487 239 aaPredicted RBP11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 DGKEP52429 567 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 HTD2P86397 168 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 GPR157Q5UAW9 335 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 AGTRAPQ6RW13 159 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 ERMP1Q7Z2K6 904 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 SH3YL1Q96HL8 342 aaPredicted RBP11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 IGSF21Q96ID5 467 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 TXNDC15Q96J42 360 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 RDH12Q96NR8 316 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 FCRL3Q96P31 734 aaPredicted RBP11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 CMKLR1Q99788 373 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 MAPKAP1Q9BPZ7 522 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 TGIF2Q9GZN2 237 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 SCN11AQ9UI33 1791 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 LOC100130705A0A1B0GUX0 176 aa11.6□□□□□ -0.55
ERGIC1-208ENST00000520399 GSRP00390 522 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms