RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 PAPD4Q6PIY7 484 aaKnown RBP16.62■□□□□ 0.25
SDC2-205ENST00000520233 SLC2A7Q6PXP3 512 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 TRPM8Q7Z2W7 1104 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 MRGPREQ86SM8 312 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 ANKRD46Q86W74 232 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 SNX32Q86XE0 403 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 MORN4Q8NDC4 146 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 ADCY4Q8NFM4 1077 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 OR11G2Q8NGC1 345 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 GOT1L1Q8NHS2 421 aaPredicted RBP16.62■□□□□ 0.25
SDC2-205ENST00000520233 PSMA8Q8TAA3 256 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 GTF2H4Q92759 462 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 DAZLQ92904 295 aaKnown RBP16.62■□□□□ 0.25
SDC2-205ENST00000520233 CTHRC1Q96CG8 243 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 CMTM5Q96DZ9 223 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 ITCHQ96J02 903 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 LPAR4Q99677 370 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 WDR77Q9BQA1 342 aaPredicted RBP16.62■□□□□ 0.25
SDC2-205ENST00000520233 NEUROD4Q9HD90 331 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 SERHLQ9NQF3 203 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 MAN2B2Q9Y2E5 1009 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 SCN2AQ99250 2005 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 SAGE2PA6NJ88 616 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 ZNF891A8MT65 544 aaPredicted RBP16.61■□□□□ 0.25
SDC2-205ENST00000520233 PLOD2O00469 737 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 RRP8O43159 456 aaKnown RBP16.61■□□□□ 0.25
SDC2-205ENST00000520233 CPSF4O95639 269 aaKnown RBP16.61■□□□□ 0.25
SDC2-205ENST00000520233 CT62P0C5K7 136 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 COX6A1P12074 109 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 WT1P19544 449 aaPredicted RBP16.61■□□□□ 0.25
SDC2-205ENST00000520233 GPC1P35052 558 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 SOX18P35713 384 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 TRPC1P48995 793 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 CDK9P50750 372 aaKnown RBP16.61■□□□□ 0.25
SDC2-205ENST00000520233 HBA1P69905 142 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 KRT72Q14CN4 511 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 COQ5Q5HYK3 327 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 PAGE3Q5JUK9 113 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 FAM111BQ6SJ93 734 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 NDUFAF7Q7L592 441 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 VWA5B2Q8N398 1253 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 NFAM1Q8NET5 270 aaPredicted RBP16.61■□□□□ 0.25
SDC2-205ENST00000520233 OR4A15Q8NGL6 344 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 ELP4Q96EB1 424 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 ART5Q96L15 291 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 PANX1Q96RD7 426 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 INPP5KQ9BT40 448 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 TUBB6Q9BUF5 446 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 SIRT3Q9NTG7 399 aaPredicted RBP16.61■□□□□ 0.25
SDC2-205ENST00000520233 P4HTMQ9NXG6 502 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 ZNF639Q9UID6 485 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 PPIEQ9UNP9 301 aaKnown RBP16.61■□□□□ 0.25
SDC2-205ENST00000520233 ERVK-11Q9UQG0 969 aa16.61■□□□□ 0.25
SDC2-205ENST00000520233 CCDC88CQ9P219 2028 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 A0A087WV62 115 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 NSG1A0A0A6YYJ2 146 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 PEX12O00623 359 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 FBP2O00757 339 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 RFXANKO14593 260 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 PLOD3O60568 738 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 DDAH2O95865 285 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 ABCB1P08183 1280 aaPredicted RBP16.6■□□□□ 0.25
SDC2-205ENST00000520233 PTGER1P34995 402 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 PGDP52209 483 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 FUT7Q11130 342 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 ZNF267Q14586 743 aaPredicted RBP16.6■□□□□ 0.25
SDC2-205ENST00000520233 TMEM107Q6UX40 140 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 RETREG3Q86VR2 466 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 SPACA3Q8IXA5 215 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 DPP10Q8N608 796 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 POU5F2Q8N7G0 328 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 DNAJB8Q8NHS0 232 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 KAT2AQ92830 837 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 SENP5Q96HI0 755 aaPredicted RBP16.6■□□□□ 0.25
SDC2-205ENST00000520233 FBXL20Q96IG2 436 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 IMMP1LQ96LU5 166 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 TRIM4Q9C037 500 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 CXorf36Q9H7Y0 433 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.6■□□□□ 0.25
SDC2-205ENST00000520233 PTGFRNQ9P2B2 879 aa16.6■□□□□ 0.25
SDC2-205ENST00000520233 A0A096LPI6 279 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 CDC14CA4D256 554 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 CCT8L1PA6NM43 557 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 NKX2-8O15522 239 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 EFSO43281 561 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 BCAS2O75934 225 aaPredicted RBP16.59■□□□□ 0.25
SDC2-205ENST00000520233 SEC24DO94855 1032 aaPredicted RBP16.59■□□□□ 0.25
SDC2-205ENST00000520233 HPP00738 406 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 ZCCHC18P0CG32 403 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 S1PR1P21453 382 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 MC3RP41968 323 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 SLC26A5P58743 744 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 MRPS35P82673 323 aaKnown RBP16.59■□□□□ 0.25
SDC2-205ENST00000520233 ATP1A4Q13733 1029 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 EXT1Q16394 746 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 MMEL1Q495T6 779 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 TRMT12Q53H54 448 aaKnown RBP16.59■□□□□ 0.25
SDC2-205ENST00000520233 C6orf10Q5SRN2 563 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 LRIF1Q5T3J3 769 aa16.59■□□□□ 0.25
SDC2-205ENST00000520233 FHL5Q5TD97 284 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms