RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 HPRP00739 348 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 TSPY4P0CV99 314 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 TSPY10P0CW01 314 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 CALCBP10092 127 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 CYP2F1P24903 491 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 TRA2BP62995 288 aaKnown RBP4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 HERVK_113P63132 956 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 ERVK-8P63133 956 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 ELP6Q0PNE2 266 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 ITPK1Q13572 414 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 FAM189A2Q15884 450 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 HKDC1Q2TB90 917 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 ADPRMQ3LIE5 342 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 TMEM30BQ3MIR4 351 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 ANKDD1AQ495B1 522 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 SLC25A24Q6NUK1 477 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 GIPC3Q8TF64 312 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 RAB7BQ96AH8 199 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 CNRIP1Q96F85 164 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 SYT15Q9BQS2 421 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 TPPP3Q9BW30 176 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 ZNF416Q9BWM5 594 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 CARD6Q9BX69 1037 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 ERVK-6Q9BXR3 956 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 ZNF696Q9H7X3 374 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 PLEKHA3Q9HB20 300 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 SPHK2Q9NRA0 654 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 CENPMQ9NSP4 180 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 WWOXQ9NZC7 414 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 TMOD2Q9NZR1 351 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 P2RX2Q9UBL9 471 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 LAMP5Q9UJQ1 280 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 FOXJ3Q9UPW0 622 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 MRPS28Q9Y2Q9 187 aaKnown RBP4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 KLHDC2Q9Y2U9 406 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 MFHAS1Q9Y4C4 1052 aa4.48□□□□□ -1.69
HMGB1P46-201ENST00000520062 IGHV3-38A0A0C4DH36 116 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 RNF222A6NCQ9 220 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 ZNF724A8MTY0 619 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 NR5A2O00482 541 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 CFLARO15519 480 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 MFN2O95140 757 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 GSTA1P08263 222 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 AOC1P19801 751 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 ADRA1AP35348 466 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 SGSHP51688 502 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 NAAAQ02083 359 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 PARP6Q2NL67 630 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 ARHGAP11AQ6P4F7 1023 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 PPP1R42Q7Z4L9 355 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 CUZD1Q86UP6 607 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 GPBP1Q86WP2 473 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 KLHDC8BQ8IXV7 354 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 CENPLQ8N0S6 344 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 FADS6Q8N9I5 356 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 CHDHQ8NE62 594 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 IPMKQ8NFU5 416 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 WDR36Q8NI36 951 aaKnown RBP4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 MCHR2Q969V1 340 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 SLC25A36Q96CQ1 311 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 C19orf43Q9BQ61 176 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 RBM4Q9BWF3 364 aaKnown RBP4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 RBM24Q9BX46 236 aaKnown RBP4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 MRPL13Q9BYD1 178 aaKnown RBP4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 GTSE1Q9NYZ3 720 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 BAIAP2L1Q9UHR4 511 aa4.47□□□□□ -1.69
HMGB1P46-201ENST00000520062 BCLAF3A2AJT9 711 aaKnown RBP4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 IFITM10A6NMD0 228 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 NEDD8-MDP1E9PL57 170 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 H3BTX0 84 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 FBP2O00757 339 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 TFECO14948 347 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 MAPK13O15264 365 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 THRBP10828 461 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 SELEP16581 610 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 HTR2AP28223 471 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 AXLP30530 894 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 SOX6P35712 828 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 PRPHP41219 470 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 SLC1A6P48664 564 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 TMEM50BP56557 158 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 PPIAP62937 165 aaKnown RBP4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 OVGP1Q12889 678 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 RAPSNQ13702 412 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 ENPP2Q13822 863 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 FASTKQ14296 549 aaKnown RBP4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 KNOP1Q1ED39 458 aaKnown RBP4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 ZNF699Q32M78 642 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 RUSC1-AS1Q66K80 236 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 ZFAND4Q86XD8 727 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 GCNT2Q8N0V5 402 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 PYROXD2Q8N2H3 581 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 OR1K1Q8NGR3 316 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 OR10T2Q8NGX3 314 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 PCNPQ8WW12 178 aaKnown RBP4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 THRSPQ92748 146 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 TSPAN18Q96SJ8 248 aa4.46□□□□□ -1.7
HMGB1P46-201ENST00000520062 CPXM1Q96SM3 734 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms