RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 IGHV1-45A0A0A0MS14 117 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 A0A1W2PS29 197 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 ASPDHA6ND91 283 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 OR2W5A6NFC9 320 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 NR5A2O00482 541 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 SOCS6O14544 535 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 ERN1O75460 977 aaKnown RBP11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 COX4I1P13073 169 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 HOXB9P17482 250 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 SOX18P35713 384 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 FEN1P39748 380 aaKnown RBP11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 NCBP2P52298 156 aaKnown RBP eCLIP11.19□□□□□ -0.622e-10■□□□□ 8.4
PDLIM5-220ENST00000514830 MANFP55145 182 aaKnown RBP11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 OR4D2P58180 307 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 FUT7Q11130 342 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 CYLC2Q14093 348 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 MAPKAPK3Q16644 382 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 VPS26BQ4G0F5 336 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 TIGD2Q4W5G0 525 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 LRIF1Q5T3J3 769 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 FHL5Q5TD97 284 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 C19orf48Q6RUI8 117 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 KIRREL2Q6UWL6 708 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 C6orf89Q6UWU4 347 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 GK5Q6ZS86 529 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 SHISA6Q6ZSJ9 500 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 LANCL3Q6ZV70 420 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 PPP1R32Q7Z5V6 425 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 TMEM151BQ8IW70 566 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 PRSS58Q8IYP2 241 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 MORN4Q8NDC4 146 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 SFXN5Q8TD22 340 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 PTPMT1Q8WUK0 201 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 KCNE4Q8WWG9 221 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 GTF2H4Q92759 462 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 DAZLQ92904 295 aaKnown RBP11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 MOAP1Q96BY2 351 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 FBXL20Q96IG2 436 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 ITCHQ96J02 903 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 ART5Q96L15 291 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 WDR77Q9BQA1 342 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 TRIM4Q9C037 500 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 RYDENQ9NUL5 291 aaKnown RBP11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 MAT2BQ9NZL9 334 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 PTGFRNQ9P2B2 879 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 IL17BQ9UHF5 180 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 PCSK5Q92824 1860 aa11.19□□□□□ -0.62
PDLIM5-220ENST00000514830 A0A096LPI6 279 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 SAGE2PA6NJ88 616 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 C9JVG2 144 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 FBP2O00757 339 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 ANGPT2O15123 496 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 DYRK3O43781 588 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 OR10H2O60403 315 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 BCAS2O75934 225 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 PSMG1O95456 288 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 IGKV3-11P04433 115 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 CD1EP15812 388 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 S1PR1P21453 382 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 PTPN6P29350 595 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 EIF2S3P41091 472 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 MAGEA8P43361 318 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 GPR143P51810 404 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 MNAT1P51948 309 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 FOXL2P58012 376 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 RPS18P62269 152 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 HBA1P69905 142 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 ID2Q02363 134 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 IL10RAQ13651 578 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 PCOLCEQ15113 449 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 ZNF750Q32MQ0 723 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 SFT2D3Q587I9 215 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 HACD2Q6Y1H2 254 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 ZNF551Q7Z340 670 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 MRGPREQ86SM8 312 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 RETREG3Q86VR2 466 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 SNX32Q86XE0 403 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 GALNT12Q8IXK2 581 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 CCDC116Q8IYX3 515 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 OR2L13Q8N349 312 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 NFAM1Q8NET5 270 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 OR7G1Q8NGA0 311 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 OR11G2Q8NGC1 345 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 RIT1Q92963 219 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 VPS33AQ96AX1 596 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 ROPN1LQ96C74 230 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 ELP4Q96EB1 424 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 IMMP1LQ96LU5 166 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 LPAR4Q99677 370 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 TUBB6Q9BUF5 446 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 SEMA4CQ9C0C4 833 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 SIRT3Q9NTG7 399 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 TAGLN3Q9UI15 199 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 PCDHGB4Q9UN71 923 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 C19orf53Q9UNZ5 99 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 ERVK-11Q9UQG0 969 aa11.18□□□□□ -0.62
PDLIM5-220ENST00000514830 TRBV5-3A0A0A0MS03 114 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 CCT8L1PA6NM43 557 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 ZNF891A8MT65 544 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms