RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 TESMINQ9Y4I5 508 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 PSAT1Q9Y617 370 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 IKBKGQ9Y6K9 419 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 SNX4O95219 450 aa18.52■□□□□ 0.56
SQSTM1-215ENST00000514093 CLPSP04118 112 aa18.52■□□□□ 0.56
SQSTM1-215ENST00000514093 CPOXP36551 454 aa18.52■□□□□ 0.56
SQSTM1-215ENST00000514093 TAS2R39P59534 338 aa18.52■□□□□ 0.56
SQSTM1-215ENST00000514093 TGFBIQ15582 683 aa18.52■□□□□ 0.56
SQSTM1-215ENST00000514093 ADAMTSL2Q86TH1 951 aa18.52■□□□□ 0.56
SQSTM1-215ENST00000514093 FAM83FQ8NEG4 500 aaPredicted RBP18.52■□□□□ 0.56
SQSTM1-215ENST00000514093 ZNF473Q8WTR7 871 aaKnown RBP18.52■□□□□ 0.56
SQSTM1-215ENST00000514093 PIK3IP1Q96FE7 263 aa18.52■□□□□ 0.56
SQSTM1-215ENST00000514093 WFIKKN1Q96NZ8 548 aa18.52■□□□□ 0.56
SQSTM1-215ENST00000514093 PHACTR1Q9C0D0 580 aa18.52■□□□□ 0.56
SQSTM1-215ENST00000514093 KLHL28Q9NXS3 571 aa18.52■□□□□ 0.56
SQSTM1-215ENST00000514093 C2orf92A0A1B0GVN3 265 aa18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 A8MXE2 369 aa18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 DEFB108AA8MXU0 73 aa18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 SNPHO15079 494 aa18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 OR10H2O60403 315 aa18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 RCBTB2O95199 551 aa18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 CNOT4O95628 575 aaKnown RBP18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 CASP3P42574 277 aa18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 FAM27E3Q08E93 113 aa18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 PRR22Q8IZ63 422 aa18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 ST13P4Q8IZP2 240 aaPredicted RBP18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 RNF175Q8N4F7 328 aa18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 C7orf57Q8NEG2 295 aa18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 PPP1R14CQ8TAE6 165 aa18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 TANKQ92844 425 aa18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 RIT1Q92963 219 aa18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 WDR34Q96EX3 536 aa18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 EFCAB11Q9BUY7 163 aa18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 RBSNQ9H1K0 784 aa18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 WIF1Q9Y5W5 379 aa18.51■□□□□ 0.55
SQSTM1-215ENST00000514093 FAM95CA0A1B0GW59 222 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 C2orf72A6NCS6 295 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 CTIFO43310 598 aaKnown RBP18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 CRLF1O75462 422 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 SCELO95171 688 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 PCNAP12004 261 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 EPORP19235 508 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 FPR1P21462 350 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 PTPN6P29350 595 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 SSTR4P31391 388 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 IRF8Q02556 426 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 CHIT1Q13231 466 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 PDK4Q16654 411 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 HIST2H2ACQ16777 129 aaPredicted RBP18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 HIST2H2AA3Q6FI13 130 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 OR4C11Q6IEV9 310 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 GPR180Q86V85 440 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 ZNF441Q8N8Z8 693 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 VPS39Q96JC1 886 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 TM9SF2Q99805 663 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 PIGQQ9BRB3 760 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 NAT9Q9BTE0 207 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 OR51B5Q9H339 312 aa18.5■□□□□ 0.55
SQSTM1-215ENST00000514093 GLOD5A6NK44 160 aa18.49■□□□□ 0.55
SQSTM1-215ENST00000514093 CAPN14A8MX76 684 aa18.49■□□□□ 0.55
SQSTM1-215ENST00000514093 H0Y3Z8 333 aa18.49■□□□□ 0.55
SQSTM1-215ENST00000514093 STK16O75716 305 aa18.49■□□□□ 0.55
SQSTM1-215ENST00000514093 NID1P14543 1247 aa18.49■□□□□ 0.55
SQSTM1-215ENST00000514093 ELK3P41970 407 aa18.49■□□□□ 0.55
SQSTM1-215ENST00000514093 HNRNPH2P55795 449 aaKnown RBP18.49■□□□□ 0.55
SQSTM1-215ENST00000514093 TNFRSF17Q02223 184 aa18.49■□□□□ 0.55
SQSTM1-215ENST00000514093 BIKQ13323 160 aa18.49■□□□□ 0.55
SQSTM1-215ENST00000514093 LAPTM5Q13571 262 aa18.49■□□□□ 0.55
SQSTM1-215ENST00000514093 SPRED3Q2MJR0 410 aa18.49■□□□□ 0.55
SQSTM1-215ENST00000514093 TMEM35AQ53FP2 167 aa18.49■□□□□ 0.55
SQSTM1-215ENST00000514093 PAGE2BQ5JRK9 111 aa18.49■□□□□ 0.55
SQSTM1-215ENST00000514093 TIGD3Q6B0B8 471 aa18.49■□□□□ 0.55
SQSTM1-215ENST00000514093 DESI1Q6ICB0 168 aa18.49■□□□□ 0.55
SQSTM1-215ENST00000514093 ZC3HC1Q86WB0 502 aaKnown RBP18.49■□□□□ 0.55
SQSTM1-215ENST00000514093 UCN3Q969E3 161 aa18.49■□□□□ 0.55
SQSTM1-215ENST00000514093 CHMP2BQ9UQN3 213 aa18.49■□□□□ 0.55
SQSTM1-215ENST00000514093 OR6C76A6NM76 312 aa18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 RNF212BA8MTL3 300 aa18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 CCNT2O60583 730 aaKnown RBP18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 GPR75O95800 540 aa18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 ACTL6AO96019 429 aa18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 CPN1P15169 458 aa18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 GGT5P36269 586 aa18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 PCDH1Q08174 1060 aa18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 SETDB1Q15047 1291 aa18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 CYP1B1Q16678 543 aa18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 KHDRBS2Q5VWX1 349 aaKnown RBP18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 ANGPTL8Q6UXH0 198 aa18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 OR1J4Q8NGS1 313 aa18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 TMEM41AQ96HV5 264 aa18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 HS3ST6Q96QI5 342 aa18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 G6PC3Q9BUM1 346 aa18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 PIGMQ9H3S5 423 aa18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 CNOT10Q9H9A5 744 aaKnown RBP18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 SNX15Q9NRS6 342 aa18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 MS4A12Q9NXJ0 267 aa18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 MXRA5Q9NR99 2828 aa18.48■□□□□ 0.55
SQSTM1-215ENST00000514093 A0A1W2PS29 197 aa18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 TLX1P31314 330 aaPredicted RBP18.47■□□□□ 0.55
SQSTM1-215ENST00000514093 MC3RP41968 323 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms