RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 AZIN2Q96A70 460 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 ZNF486Q96H40 463 aaPredicted RBP4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 FAM218AQ96MZ4 157 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 INPP4AQ96PE3 977 aaPredicted RBP4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 UHRF2Q96PU4 802 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 RBM24Q9BX46 236 aaKnown RBP4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 PINK1Q9BXM7 581 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 LRRCC1Q9C099 1032 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 RPAP3Q9H6T3 665 aaPredicted RBP4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 SMPD3Q9NY59 655 aaPredicted RBP4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 CHRNA9Q9UGM1 479 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 LNPEPQ9UIQ6 1025 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 ZHX2Q9Y6X8 837 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 OR5H15A6NDH6 313 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 A8MU76 341 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 TMCO5BA8MYB1 307 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 K7EQM0 130 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 TSPAN2O60636 221 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 NTN1O95631 604 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 MBD3O95983 291 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 CSF2P04141 144 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 UGT2B4P06133 528 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 TSPAN8P19075 237 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 PBLDP30039 288 aaPredicted RBP4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 TRIM23P36406 574 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 MTIF2P46199 727 aaKnown RBP4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 METAP1P53582 386 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 ERVFC1-1P60608 527 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 PPIAP62937 165 aaKnown RBP4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 PHEXP78562 749 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 NAAAQ02083 359 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 EXOSC2Q13868 293 aaKnown RBP4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 HNRNPDQ14103 355 aaKnown RBP4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 GCKRQ14397 625 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 RBBP5Q15291 538 aaKnown RBP4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 HKDC1Q2TB90 917 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 ZNF672Q499Z4 452 aaPredicted RBP4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 FFAR4Q5NUL3 377 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 ASPHD2Q6ICH7 369 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 SLC39A4Q6P5W5 647 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 CBLN3Q6UW01 205 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 OR4N5Q8IXE1 308 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 SAMD14Q8IZD0 417 aaPredicted RBP4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 PYROXD2Q8N2H3 581 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 ARFGAP2Q8N6H7 521 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 ICA1LQ8NDH6 482 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 DDHD1Q8NEL9 900 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 TRIM58Q8NG06 486 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 SCARB1Q8WTV0 552 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 ZBTB9Q96C00 473 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 ZNF524Q96C55 264 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 HPDLQ96IR7 371 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 VSTM2LQ96N03 204 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 ZNF607Q96SK3 696 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 PUS3Q9BZE2 481 aaKnown RBP4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 HOXD1Q9GZZ0 328 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 MMP28Q9H239 520 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 DCTPP1Q9H773 170 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 KAT8Q9H7Z6 458 aaKnown RBP4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 MTHFD2LQ9H903 347 aaPredicted RBP4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 KCNK13Q9HB14 408 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 KLK11Q9UBX7 282 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 B9D1Q9UPM9 204 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 ANGPTL3Q9Y5C1 460 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 FKBP7Q9Y680 259 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 RNF215Q9Y6U7 377 aa4.32□□□□□ -1.72
CALCOCO2-222ENST00000514006 PARD3Q8TEW0 1356 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 A0A087WW49 117 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 C15orf38-AP3S2A0A0A6YYH1 394 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 IQCMA0A1B0GVH7 501 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 LOC390937A0A1W2PQ73 354 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 WASH3PC4AMC7 463 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 H3BTX0 84 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 UBXN8O00124 270 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 SDHDO14521 159 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 MTRF1O75570 445 aaKnown RBP4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 KIAA0754O94854 1291 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 CD48P09326 243 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 MYOGP15173 224 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 MAP2K2P36507 400 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 TSFMP43897 325 aaKnown RBP4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 SGSHP51688 502 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 SRYQ05066 204 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 RIGQ13278 110 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 HAGHQ16775 308 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 SHROOM1Q2M3G4 852 aaPredicted RBP4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 DCAF4L1Q3SXM0 396 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 TCHHL1Q5QJ38 904 aaPredicted RBP4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 WASH2PQ6VEQ5 465 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 CENPUQ71F23 418 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 LPCAT2Q7L5N7 544 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 GPR142Q7Z601 462 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 LHFPL4Q7Z7J7 247 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 SMIM29Q86T20 159 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 RANBP3LQ86VV4 465 aaPredicted RBP4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 CCDC36Q8IYA8 594 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 DCLK2Q8N568 766 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 STEAP2Q8NFT2 490 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 OR6F1Q8NGZ6 308 aa4.31□□□□□ -1.72
CALCOCO2-222ENST00000514006 ATP8B4Q8TF62 1192 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms