RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 RBSNQ9H1K0 784 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 EHD1Q9H4M9 534 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 CXorf56Q9H5V9 222 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 GPRC5BQ9NZH0 403 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 ZNF490Q9ULM2 529 aaPredicted RBP9.95□□□□□ -0.82
DDX41-216ENST00000513562 ERVK-19Q9WJR5 959 aa9.95□□□□□ -0.82
DDX41-216ENST00000513562 NCKAP5O14513 1909 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 NPEPPSL1A6NEC2 478 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 RNF223E7ERA6 249 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 RTCAO00442 366 aaKnown RBP9.94□□□□□ -0.82
DDX41-216ENST00000513562 PRAMEF4O60810 478 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 FGGP02679 453 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 ALOX15P16050 662 aaPredicted RBP9.94□□□□□ -0.82
DDX41-216ENST00000513562 ZNF37AP17032 561 aaPredicted RBP9.94□□□□□ -0.82
DDX41-216ENST00000513562 PGAM1P18669 254 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 CPN2P22792 545 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 CHMP24386 653 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 GCKP35557 465 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 UGT2B10P36537 528 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 CD79BP40259 229 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 TMED10P49755 219 aaKnown RBP9.94□□□□□ -0.82
DDX41-216ENST00000513562 NR1H2P55055 460 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 ATP5J2P56134 94 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 C18orf21Q32NC0 220 aaPredicted RBP9.94□□□□□ -0.82
DDX41-216ENST00000513562 PRAMEF9Q5VWM5 478 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 SRFBP1Q8NEF9 429 aaKnown RBP9.94□□□□□ -0.82
DDX41-216ENST00000513562 DOK4Q8TEW6 326 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 MAIP1Q8WWC4 291 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 ANKRD7Q92527 254 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 RHBDF1Q96CC6 855 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 STARD4Q96DR4 205 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 WDR34Q96EX3 536 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 DESI2Q9BSY9 194 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 CAPS2Q9BXY5 557 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 MS4A8Q9BY19 250 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 TRIM5Q9C035 493 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 RPF2Q9H7B2 306 aaKnown RBP9.94□□□□□ -0.82
DDX41-216ENST00000513562 SNX15Q9NRS6 342 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 CORO1CQ9ULV4 474 aaPredicted RBP9.94□□□□□ -0.82
DDX41-216ENST00000513562 VWA7Q9Y334 891 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 OARD1Q9Y530 152 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 MPDZO75970 2070 aa9.94□□□□□ -0.82
DDX41-216ENST00000513562 SONP18583 2426 aaKnown RBP9.93□□□□□ -0.82
DDX41-216ENST00000513562 A0A087X1B8 175 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 C2orf92A0A1B0GVN3 265 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 GNB5O14775 395 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 CD5LO43866 347 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 CDH16O75309 829 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 TP53P04637 393 aaPredicted RBP9.93□□□□□ -0.82
DDX41-216ENST00000513562 CRHP06850 196 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 CD22P20273 847 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 RPP38P78345 283 aaKnown RBP9.93□□□□□ -0.82
DDX41-216ENST00000513562 SRYQ05066 204 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 ZNF267Q14586 743 aaPredicted RBP9.93□□□□□ -0.82
DDX41-216ENST00000513562 FAM45BPQ6NSW5 357 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 ZNF474Q6S9Z5 364 aaPredicted RBP9.93□□□□□ -0.82
DDX41-216ENST00000513562 ENPP6Q6UWR7 440 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 ZNF550Q7Z398 422 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 OR1J4Q8NGS1 313 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 FAM45AQ8TCE6 357 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 TANKQ92844 425 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 TP53INP1Q96A56 240 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 CTHRC1Q96CG8 243 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 PTCD3Q96EY7 689 aaKnown RBP9.93□□□□□ -0.82
DDX41-216ENST00000513562 VPS39Q96JC1 886 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 FAM111AQ96PZ2 611 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 PELOQ9BRX2 385 aaKnown RBP9.93□□□□□ -0.82
DDX41-216ENST00000513562 OR2B2Q9GZK3 357 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 MS4A12Q9NXJ0 267 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 WWOXQ9NZC7 414 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 SLC17A6Q9P2U8 582 aa9.93□□□□□ -0.82
DDX41-216ENST00000513562 CHD3Q12873 2000 aaKnown RBP9.92□□□□□ -0.82
DDX41-216ENST00000513562 LRRC14BA6NHZ5 514 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 PLOD2O00469 737 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 HCRTR2O43614 444 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 PRKRAO75569 313 aaKnown RBP9.92□□□□□ -0.82
DDX41-216ENST00000513562 SMNDC1O75940 238 aaKnown RBP eCLIP9.92□□□□□ -0.82
DDX41-216ENST00000513562 TGM6O95932 706 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 KRT14P02533 472 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 POU2F1P14859 743 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 SSR2P43308 183 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 LHX2P50458 406 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 GFRA1P56159 465 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 TNFRSF17Q02223 184 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 PCDH1Q08174 1060 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 FUT7Q11130 342 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 VEZF1Q14119 521 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 DOC2AQ14183 400 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 ETFDHQ16134 617 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 CLEC12BQ2HXU8 276 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 AP5B1Q2VPB7 878 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 CHRFAM7AQ494W8 412 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 TMEM35AQ53FP2 167 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 C10orf62Q5T681 223 aaPredicted RBP9.92□□□□□ -0.82
DDX41-216ENST00000513562 TMEM81Q6P7N7 255 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 VWA1Q6PCB0 445 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 ANGPTL8Q6UXH0 198 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 ADAMTSL2Q86TH1 951 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 GRAMD2AQ8IUY3 354 aa9.92□□□□□ -0.82
DDX41-216ENST00000513562 TMEM139Q8IV31 216 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms