RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	ZSCAN1	Q8NBB4	408 aa		13.56	□□□□□ -0.24
MATR3-238	ENST00000512107	APCDD1L	Q8NCL9	501 aa		13.56	□□□□□ -0.24
MATR3-238	ENST00000512107	OR7G2	Q8NG99	324 aa		13.56	□□□□□ -0.24
MATR3-238	ENST00000512107	METTL21A	Q8WXB1	218 aa		13.56	□□□□□ -0.24
MATR3-238	ENST00000512107	PSMF1	Q92530	271 aa		13.56	□□□□□ -0.24
MATR3-238	ENST00000512107	NCLN	Q969V3	563 aa		13.56	□□□□□ -0.24
MATR3-238	ENST00000512107	VPS33A	Q96AX1	596 aa		13.56	□□□□□ -0.24
MATR3-238	ENST00000512107	TESC	Q96BS2	214 aa		13.56	□□□□□ -0.24
MATR3-238	ENST00000512107	CTHRC1	Q96CG8	243 aa		13.56	□□□□□ -0.24
MATR3-238	ENST00000512107	MTERF3	Q96E29	417 aa		13.56	□□□□□ -0.24
MATR3-238	ENST00000512107	DGAT2	Q96PD7	388 aa		13.56	□□□□□ -0.24
MATR3-238	ENST00000512107	DUSP26	Q9BV47	211 aa		13.56	□□□□□ -0.24
MATR3-238	ENST00000512107	MYLK2	Q9H1R3	596 aa		13.56	□□□□□ -0.24
MATR3-238	ENST00000512107	CXorf36	Q9H7Y0	433 aa		13.56	□□□□□ -0.24
MATR3-238	ENST00000512107	ADAP2	Q9NPF8	381 aa		13.56	□□□□□ -0.24
MATR3-238	ENST00000512107	MIEF1	Q9NQG6	463 aa		13.56	□□□□□ -0.24
MATR3-238	ENST00000512107	ERVK-19	Q9WJR5	959 aa		13.56	□□□□□ -0.24
MATR3-238	ENST00000512107	DTX4	Q9Y2E6	619 aa		13.56	□□□□□ -0.24
MATR3-238	ENST00000512107	LOC400499	M0QZD8	3231 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	FCHO1	O14526	889 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	PDPK1	O15530	556 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	ZNF354A	O60765	605 aa	Predicted RBP	13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	FAM107A	O95990	144 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	HP	P00738	406 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	IGKV3-11	P04433	115 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	ATP1B1	P05026	303 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	PGD	P52209	483 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	NCBP2	P52298	156 aa	Known RBP eCLIP	13.55	□□□□□ -0.24	2e-15	■■■■■ 31.3
MATR3-238	ENST00000512107	CXADR	P78310	365 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	KLF10	Q13118	480 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	TLR1	Q15399	786 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	GTDC1	Q4AE62	458 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	CRTC2	Q53ET0	693 aa	Predicted RBP	13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	DCAF10	Q5QP82	559 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	LRRC69	Q6ZNQ3	347 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	LRRC25	Q8N386	305 aa	Predicted RBP	13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	ZNF615	Q8N8J6	731 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	SLC2A12	Q8TD20	617 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	SENP5	Q96HI0	755 aa	Predicted RBP	13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	BBS4	Q96RK4	519 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	CCDC106	Q9BWC9	280 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	PRORY	Q9H606	182 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	SERHL	Q9NQF3	203 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	CCDC167	Q9P0B6	97 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	PPIE	Q9UNP9	301 aa	Known RBP	13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	KCNMB2	Q9Y691	235 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	ZNF780B	Q9Y6R6	833 aa		13.55	□□□□□ -0.24
MATR3-238	ENST00000512107	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	MGA	Q8IWI9	3026 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	NSG1	A0A0A6YYJ2	146 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107		K7EM74	188 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	OR10H2	O60403	315 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	TNNI3	P19429	210 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	MC3R	P41968	323 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	POLR2J	P52435	117 aa	Known RBP	13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	FUT7	Q11130	342 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	MAP4K2	Q12851	820 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	HSPB3	Q12988	150 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	RAPSN	Q13702	412 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	TBR1	Q16650	682 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	SPRED3	Q2MJR0	410 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	LINC00303	Q3SY05	128 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	TIGD2	Q4W5G0	525 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	PAGE3	Q5JUK9	113 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	METTL21C	Q5VZV1	264 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	B3GNTL1	Q67FW5	361 aa	Predicted RBP	13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	FCRLB	Q6BAA4	426 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	SLC2A7	Q6PXP3	512 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	BLOC1S3	Q6QNY0	202 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	TMEM107	Q6UX40	140 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	MTDH	Q86UE4	582 aa	Known RBP	13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	RETREG3	Q86VR2	466 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	C9orf40	Q8IXQ3	194 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	OR8J2	Q8NGG1	315 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	ELP5	Q8TE02	316 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	SNRNP27	Q8WVK2	155 aa	Known RBP	13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	RIT1	Q92963	219 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	BHLHE41	Q9C0J9	482 aa	Predicted RBP	13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	OR8D2	Q9GZM6	311 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107	ENTPD4	Q9Y227	616 aa		13.54	□□□□□ -0.24
MATR3-238	ENST00000512107		A0A1W2PRB8	838 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	FAM234B	A2RU67	622 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107		A6NL46	340 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	NR5A2	O00482	541 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	FBP2	O00757	339 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	PGR	P06401	933 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	HOXB9	P17482	250 aa	Predicted RBP	13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	PTPN6	P29350	595 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	S100A3	P33764	101 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	GALNS	P34059	522 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	SLC37A1	P57057	533 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	TMPRSS3	P57727	454 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	HBA1	P69905	142 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	GAB1	Q13480	694 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	RPS6KA2	Q15349	733 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	COL28A1	Q2UY09	1125 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	BTBD16	Q32M84	506 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	VPS26B	Q4G0F5	336 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	BROX	Q5VW32	411 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	PLAG1	Q6DJT9	500 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms