RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 TIMMDC1Q9NPL8 285 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 DEPPQ9NTK1 212 aa14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 KLF13Q9Y2Y9 288 aaPredicted RBP14.93□□□□□ -0.02
PDLIM5-216ENST00000511767 A8MVJ9 347 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 NPIPA5E9PKD4 350 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 AZIN1O14977 448 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 LRRTM2O43300 516 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 SSTR4P31391 388 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 DUSP2Q05923 314 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 ZNF791Q3KP31 576 aaPredicted RBP14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 UGT3A2Q3SY77 523 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 C4orf17Q53FE4 359 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 SPIN4Q56A73 249 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 TNFAIP8L3Q5GJ75 292 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 SPDYAQ5MJ70 313 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 FAM111BQ6SJ93 734 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 OPN5Q6U736 354 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 RNF111Q6ZNA4 994 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 Q6ZSR9 355 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 EXOC3L1Q86VI1 746 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 POGLUT1Q8NBL1 392 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 FAM98AQ8NCA5 519 aaKnown RBP14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 OR6Y1Q8NGX8 325 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 SSC4DQ8WTU2 575 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 RELTQ969Z4 430 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 CTHRC1Q96CG8 243 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 CNRIP1Q96F85 164 aaPredicted RBP14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 GPR137Q96N19 417 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 SMC6Q96SB8 1091 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 TRMOQ9BU70 441 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 IQCGQ9H095 443 aaKnown RBP14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 OR10A5Q9H207 317 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 HPF1Q9NWY4 346 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 ZNF639Q9UID6 485 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 NPIPA1Q9UND3 350 aa14.92□□□□□ -0.02
PDLIM5-216ENST00000511767 OR6C76A6NM76 312 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 NPIPB8E9PQR5 432 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 PCDH7O60245 1069 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 NPHS1O60500 1241 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 CRCPO75575 148 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 ERAL1O75616 437 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 LDLRP01130 860 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 IL3P08700 152 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 ANXA4P09525 319 aaPredicted RBP14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 CNR1P21554 472 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 NT5EP21589 574 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 TIA1P31483 386 aaKnown RBP eCLIP14.91□□□□□ -0.024e-7■■■■■ 27.1
PDLIM5-216ENST00000511767 ETV4P43268 484 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 MEOX1P50221 254 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 PRSS53Q2L4Q9 553 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 PRICKLE4Q2TBC4 344 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 ARL13AQ5H913 290 aaPredicted RBP14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 CLEC6AQ6EIG7 209 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 FAM180BQ6P0A1 224 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 SLC29A4Q7RTT9 530 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 GALNT12Q8IXK2 581 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 ZNF441Q8N8Z8 693 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 ZFP62Q8NB50 900 aaPredicted RBP14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 PSD4Q8NDX1 1056 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 OR7G1Q8NGA0 311 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 ADIPOR1Q96A54 375 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 TP53INP1Q96A56 240 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 METTL2AQ96IZ6 378 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 WWTR1Q9GZV5 400 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 TUBB1Q9H4B7 451 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 SH2D2AQ9NP31 389 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 RRAGDQ9NQL2 400 aaPredicted RBP14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 RYDENQ9NUL5 291 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 WBP11Q9Y2W2 641 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 TRAF6Q9Y4K3 522 aa14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 UTP20O75691 2785 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-216ENST00000511767 C2orf92A0A1B0GVN3 265 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 GNG14A0A1W2PPG7 69 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 PINLYPA6NC86 204 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 GOLGA6L10A6NI86 522 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 ATP1B1P05026 303 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 BPGMP07738 259 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 PRPH2P23942 346 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 ALDH9A1P49189 494 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 GPR85P60893 370 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 C2orf80Q0P641 193 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 EBPQ15125 230 aaKnown RBP14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 KRT71Q3SY84 523 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 RTL4Q6ZR62 310 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 CHERPQ8IWX8 916 aaKnown RBP14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 CCDC116Q8IYX3 515 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 CLYBLQ8N0X4 340 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 GOLM1Q8NBJ4 401 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 SIMC1Q8NDZ2 872 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 FAM76AQ8TAV0 307 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 MECRQ9BV79 373 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 TSPAN10Q9H1Z9 355 aaPredicted RBP14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 TAS2R7Q9NYW3 318 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 MAT2BQ9NZL9 334 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 SENP1Q9P0U3 644 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 UTS2RQ9UKP6 389 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 EXO1Q9UQ84 846 aaKnown RBP14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 ZNF835Q9Y2P0 537 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 ZNF780BQ9Y6R6 833 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms