RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 TMEM125Q96AQ2 219 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 CNRIP1Q96F85 164 aaPredicted RBP12.95□□□□□ -0.34
DDX41-212ENST00000511040 PAIP2Q9BPZ3 127 aaKnown RBP12.95□□□□□ -0.34
DDX41-212ENST00000511040 BRINP2Q9C0B6 783 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 TRIM45Q9H8W5 580 aaPredicted RBP12.95□□□□□ -0.34
DDX41-212ENST00000511040 LRTM1Q9HBL6 345 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 GIMAP2Q9UG22 337 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 ZDHHC2Q9UIJ5 367 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 PSME2Q9UL46 239 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 ZNF780BQ9Y6R6 833 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 A8MVJ9 347 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 G3V3Y1 287 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 PIP5K1BO14986 540 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 TM9SF1O15321 606 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 ITM2AO43736 263 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 NME2P1O60361 137 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 CHEK2O96017 543 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 FGF4P08620 206 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 DRD2P14416 443 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 BGNP21810 368 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 NME2P22392 152 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 GALNSP34059 522 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 ZNF763Q0D2J5 394 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 CASP8Q14790 479 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 EXOSC7Q15024 291 aaKnown RBP12.94□□□□□ -0.34
DDX41-212ENST00000511040 GALNTL6Q49A17 601 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 C6orf163Q5TEZ5 329 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 ZNF324BQ6AW86 544 aaPredicted RBP12.94□□□□□ -0.34
DDX41-212ENST00000511040 Q6ZSR9 355 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 SLC29A4Q7RTT9 530 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 CLYBLQ8N0X4 340 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 TMEM178AQ8NBL3 297 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 OR6Y1Q8NGX8 325 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 MGARPQ8TDB4 240 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 ZNF681Q96N22 645 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 WWTR1Q9GZV5 400 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 TSPAN10Q9H1Z9 355 aaPredicted RBP12.94□□□□□ -0.34
DDX41-212ENST00000511040 TMBIM4Q9HC24 238 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.94□□□□□ -0.34
DDX41-212ENST00000511040 HPF1Q9NWY4 346 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 C1orf109Q9NX04 203 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 SIRT5Q9NXA8 310 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 ACTL7BQ9Y614 415 aa12.94□□□□□ -0.34
DDX41-212ENST00000511040 PRRC2CQ9Y520 2896 aaKnown RBP12.94□□□□□ -0.34
DDX41-212ENST00000511040 CROCCQ5TZA2 2017 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 BIRC5O15392 142 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 SKAP2O75563 359 aaPredicted RBP12.93□□□□□ -0.34
DDX41-212ENST00000511040 ZWINTO95229 277 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 HSPA4LO95757 839 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 CRYABP02511 175 aaKnown RBP12.93□□□□□ -0.34
DDX41-212ENST00000511040 SERPINE1P05121 402 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 DHRS4L1P0CG22 281 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 NEFHP12036 1026 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 PCSK2P16519 638 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 TACR1P25103 407 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 RFC3P40938 356 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 KCNK10P57789 538 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 GPR85P60893 370 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 MAGOHP61326 146 aaKnown RBP12.93□□□□□ -0.34
DDX41-212ENST00000511040 RPL38P63173 70 aaKnown RBP12.93□□□□□ -0.34
DDX41-212ENST00000511040 SRSF1Q07955 248 aaKnown RBP eCLIP12.93□□□□□ -0.34
DDX41-212ENST00000511040 MGAT2Q10469 447 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 FUT7Q11130 342 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 ELOAQ14241 798 aaKnown RBP12.93□□□□□ -0.34
DDX41-212ENST00000511040 HEPACAMQ14CZ8 416 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 KIAA0040Q15053 153 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 PRICKLE4Q2TBC4 344 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 PIGGQ5H8A4 983 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 FAM71E1Q6IPT2 247 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 TMEM64Q6YI46 380 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 TICAM1Q8IUC6 712 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 SULF2Q8IWU5 870 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 CCDC116Q8IYX3 515 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 LRRC25Q8N386 305 aaPredicted RBP12.93□□□□□ -0.34
DDX41-212ENST00000511040 VWA5B2Q8N398 1253 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 CPSF7Q8N684 471 aaKnown RBP12.93□□□□□ -0.34
DDX41-212ENST00000511040 ZNF615Q8N8J6 731 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 ST6GALNAC3Q8NDV1 305 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 SIMC1Q8NDZ2 872 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 OR9A2Q8NGT5 310 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 CLHC1Q8NHS4 586 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 NUBPLQ8TB37 319 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 NR4A3Q92570 626 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 GFM2Q969S9 779 aaKnown RBP12.93□□□□□ -0.34
DDX41-212ENST00000511040 EGLN2Q96KS0 407 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 SLX1AQ9BQ83 275 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 STMN4Q9H169 189 aaPredicted RBP12.93□□□□□ -0.34
DDX41-212ENST00000511040 OR10A5Q9H207 317 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 ANKRA2Q9H9E1 313 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 MYNNQ9NPC7 610 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 TIMMDC1Q9NPL8 285 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 MAT2BQ9NZL9 334 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 BCAP29Q9UHQ4 241 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 EXO1Q9UQ84 846 aaKnown RBP12.93□□□□□ -0.34
DDX41-212ENST00000511040 PCDHGB6Q9Y5F9 930 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 MAST4O15021 2626 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 SVILO95425 2214 aa12.93□□□□□ -0.34
DDX41-212ENST00000511040 ESPL1Q14674 2120 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 A0A0G2JMM0 328 aa12.92□□□□□ -0.34
DDX41-212ENST00000511040 C2orf92A0A1B0GVN3 265 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms