RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 QPCTLQ9NXS2 382 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 NUDT4Q9NZJ9 180 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 RNF11Q9Y3C5 154 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 C15orf38-AP3S2A0A0A6YYH1 394 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 IQANK1A0A1B0GTG1 560 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 ANKRD33BA6NCL7 494 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 C2orf72A6NCS6 295 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 HSPB2A8KAH6 182 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 AHRRA9YTQ3 701 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 SUPT3HB4E1H0 165 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 KERAO60938 352 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 SUPT3HO75486 399 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 ATE1O95260 518 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 HPNP05981 417 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 BMP7P18075 431 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 GDF1P27539 372 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 TIMP3P35625 211 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 PIK3CBP42338 1070 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 ASCL1P50553 236 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 PLIN5Q00G26 463 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 DUSP2Q05923 314 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 FOXF2Q12947 444 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 HSPB2Q16082 182 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 RNF111Q6ZNA4 994 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 Q71RC1 249 aaPredicted RBP14.55□□□□□ -0.08
RAB40C-202ENST00000509637 C9orf106Q8NAJ2 232 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 STAG3L4Q8TBR4 150 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 FAM222BQ8WU58 562 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 DIO2Q92813 273 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 RIT1Q92963 219 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 RILPQ96NA2 401 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 GPR78Q96P69 363 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 UGT2B28Q9BY64 529 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 ANGPTL4Q9BY76 406 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 JKAMPQ9P055 326 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 OPTCQ9UBM4 332 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 B4GALT7Q9UBV7 327 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 TSC22D4Q9Y3Q8 395 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 NPFFR2Q9Y5X5 522 aa14.55□□□□□ -0.08
RAB40C-202ENST00000509637 FLNAP21333 2647 aaKnown RBP14.55□□□□□ -0.08
RAB40C-202ENST00000509637 MED12LQ86YW9 2145 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 VPS13CQ709C8 3753 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 B4DXG7 233 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 RAD51CO43502 376 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 SIX3O95343 332 aaPredicted RBP14.54□□□□□ -0.08
RAB40C-202ENST00000509637 FAM58BPP0C7Q3 252 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 COX7A2P14406 83 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 SERPINB3P29508 390 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 CASP3P42574 277 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 NAGLUP54802 743 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 MGAT2Q10469 447 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 FUT7Q11130 342 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 WIPI1Q5MNZ9 446 aaPredicted RBP14.54□□□□□ -0.08
RAB40C-202ENST00000509637 NSUN5P2Q63ZY6 315 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 PAMR1Q6UXH9 720 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 PPM1NQ8N819 430 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 SLC44A1Q8WWI5 657 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 UBE2E3Q969T4 207 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 MBD6Q96DN6 1003 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 RMND5BQ96G75 393 aaPredicted RBP14.54□□□□□ -0.08
RAB40C-202ENST00000509637 G6PC3Q9BUM1 346 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 SLC24A3Q9HC58 644 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 MS4A12Q9NXJ0 267 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 PHF11Q9UIL8 331 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 IKBKGQ9Y6K9 419 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 SPACA6W5XKT8 324 aa14.54□□□□□ -0.08
RAB40C-202ENST00000509637 FN1P02751 2386 aaKnown RBP14.53□□□□□ -0.08
RAB40C-202ENST00000509637 DNHD1Q96M86 4753 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 A0A1B0GTL3 188 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 C2orf92A0A1B0GVN3 265 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 CCDC188H7C350 402 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 GNB5O14775 395 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 TRAPPC6AO75865 159 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 LTA4HP09960 611 aaKnown RBP14.53□□□□□ -0.08
RAB40C-202ENST00000509637 SLC35E2P0CK97 266 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 DNASE1P24855 282 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 PTPN6P29350 595 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 RAP1GDS1P52306 607 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 GUCY2DQ02846 1103 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 SETDB1Q15047 1291 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 CPSF6Q16630 551 aaKnown RBP eCLIP14.53□□□□□ -0.08
RAB40C-202ENST00000509637 GRTP1Q5TC63 336 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 FAM111BQ6SJ93 734 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 ZDHHC24Q6UX98 284 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 SLC29A4Q7RTT9 530 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 YRDCQ86U90 279 aaKnown RBP14.53□□□□□ -0.08
RAB40C-202ENST00000509637 CTAGE3PQ8IX95 158 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 PLD6Q8N2A8 252 aaKnown RBP14.53□□□□□ -0.08
RAB40C-202ENST00000509637 FBF1Q8TES7 1133 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 ART5Q96L15 291 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 CDK15Q96Q40 435 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 ALPK1Q96QP1 1244 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 NODALQ96S42 347 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 ERP44Q9BS26 406 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 NXF5Q9H1B4 397 aaKnown RBP14.53□□□□□ -0.08
RAB40C-202ENST00000509637 NMRAL1Q9HBL8 299 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 ZNF629Q9UEG4 869 aaPredicted RBP14.53□□□□□ -0.08
RAB40C-202ENST00000509637 C15orf41Q9Y2V0 281 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 SAR1BQ9Y6B6 198 aa14.53□□□□□ -0.08
RAB40C-202ENST00000509637 MBD3L4A6NDZ8 208 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms