RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 CNPPD1Q9BV87 410 aa14.93□□□□□ -0.02
PDLIM5-212ENST00000509333 FAIM2Q9BWQ8 316 aa14.93□□□□□ -0.02
PDLIM5-212ENST00000509333 TIMMDC1Q9NPL8 285 aa14.93□□□□□ -0.02
PDLIM5-212ENST00000509333 DEPPQ9NTK1 212 aa14.93□□□□□ -0.02
PDLIM5-212ENST00000509333 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.93□□□□□ -0.02
PDLIM5-212ENST00000509333 KLF13Q9Y2Y9 288 aaPredicted RBP14.93□□□□□ -0.02
PDLIM5-212ENST00000509333 A8MVJ9 347 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 NPIPA5E9PKD4 350 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 AZIN1O14977 448 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 LRRTM2O43300 516 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 SSTR4P31391 388 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 DUSP2Q05923 314 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 ZNF791Q3KP31 576 aaPredicted RBP14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 UGT3A2Q3SY77 523 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 C4orf17Q53FE4 359 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 SPIN4Q56A73 249 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 TNFAIP8L3Q5GJ75 292 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 SPDYAQ5MJ70 313 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 FAM111BQ6SJ93 734 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 OPN5Q6U736 354 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 RNF111Q6ZNA4 994 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 Q6ZSR9 355 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 EXOC3L1Q86VI1 746 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 PIP4P2Q8N4L2 257 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 POGLUT1Q8NBL1 392 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 FAM98AQ8NCA5 519 aaKnown RBP14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 OR6Y1Q8NGX8 325 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 SSC4DQ8WTU2 575 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 RELTQ969Z4 430 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 CTHRC1Q96CG8 243 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 CNRIP1Q96F85 164 aaPredicted RBP14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 GPR137Q96N19 417 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 SMC6Q96SB8 1091 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 TRMOQ9BU70 441 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 IQCGQ9H095 443 aaKnown RBP14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 OR10A5Q9H207 317 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 HPF1Q9NWY4 346 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 ZNF639Q9UID6 485 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 NPIPA1Q9UND3 350 aa14.92□□□□□ -0.02
PDLIM5-212ENST00000509333 OR6C76A6NM76 312 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 NPIPB8E9PQR5 432 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 PCDH7O60245 1069 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 NPHS1O60500 1241 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 CRCPO75575 148 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 ERAL1O75616 437 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 LDLRP01130 860 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 IL3P08700 152 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 ANXA4P09525 319 aaPredicted RBP14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 CNR1P21554 472 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 NT5EP21589 574 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 TIA1P31483 386 aaKnown RBP eCLIP14.91□□□□□ -0.024e-7■■■■■ 27.1
PDLIM5-212ENST00000509333 ETV4P43268 484 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 MEOX1P50221 254 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 PRSS53Q2L4Q9 553 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 PRICKLE4Q2TBC4 344 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 ARL13AQ5H913 290 aaPredicted RBP14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 CLEC6AQ6EIG7 209 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 FAM180BQ6P0A1 224 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 SLC29A4Q7RTT9 530 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 GALNT12Q8IXK2 581 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 ZNF441Q8N8Z8 693 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 ZFP62Q8NB50 900 aaPredicted RBP14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 PSD4Q8NDX1 1056 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 OR7G1Q8NGA0 311 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 ADIPOR1Q96A54 375 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 TP53INP1Q96A56 240 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 METTL2AQ96IZ6 378 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 WWTR1Q9GZV5 400 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 TUBB1Q9H4B7 451 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 SH2D2AQ9NP31 389 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 RRAGDQ9NQL2 400 aaPredicted RBP14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 RYDENQ9NUL5 291 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 WBP11Q9Y2W2 641 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 TRAF6Q9Y4K3 522 aa14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 UTP20O75691 2785 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-212ENST00000509333 C2orf92A0A1B0GVN3 265 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 GNG14A0A1W2PPG7 69 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 PINLYPA6NC86 204 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 GOLGA6L10A6NI86 522 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 ATP1B1P05026 303 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 BPGMP07738 259 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 PRPH2P23942 346 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 ALDH9A1P49189 494 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 GPR85P60893 370 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 C2orf80Q0P641 193 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 EBPQ15125 230 aaKnown RBP14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 KRT71Q3SY84 523 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 RTL4Q6ZR62 310 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 CHERPQ8IWX8 916 aaKnown RBP14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 CCDC116Q8IYX3 515 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 CLYBLQ8N0X4 340 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 GOLM1Q8NBJ4 401 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 SIMC1Q8NDZ2 872 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 FAM76AQ8TAV0 307 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 MECRQ9BV79 373 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 TSPAN10Q9H1Z9 355 aaPredicted RBP14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 TAS2R7Q9NYW3 318 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 MAT2BQ9NZL9 334 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 SENP1Q9P0U3 644 aa14.9□□□□□ -0.02
PDLIM5-212ENST00000509333 UTS2RQ9UKP6 389 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms